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ACTA HORTICULTURAE SINICA ›› 2012, Vol. 39 ›› Issue (11): 2245-2250.

• Research Notes • Previous Articles     Next Articles

The Construction and Instruction Manual of Apple Functional Genomic Database

 ZHANG  Shi-Zhong, FU  Ying, ZHOU  Bo, JIANG  Ze-Sheng, XU  Rui-Rui, SHU  Huai-Rui   

  1. (1College of Horticulture Science and Technology,Shandong Agricultural Unversity,Tai’an,Shandong 271018,China;2College of Life Science,Shandong Agricultural Unversity,Tai’an,Shandong 271018,China;3 College of Biological and Agricultural Engineering,Weifang University,Weifang,Shandong 261061,China)
  • Online:2012-11-25 Published:2012-11-25

Abstract: Through analyzing and mining the genome-wide sequence of the apple,the Apple Gene Function and Gene Family DataBase(AppleGFDB)provide the classification and phylogenetic analysis of 159 gene families in apple. The database includes a series of information about the genes,including nucleotide or protein sequence,chromosomal location,gene structure,gene ontology(GO),protein conserved domain,interpro,the expression profile,microRNA and related publication. Furthermore,Apple GFDB specially develops a user-interactive platform which provided the researchers a chance to modify annotation of apple genes and submit publication. AppleGFDB was available at http://www. applegene. org/ or http://gfdb. sdau. edu. cn/.

Key words: apple, gene function, gene family, database

CLC Number: