Genome-wide Identification and Expression Analysis of the MADS-box Gene Family in Vitis vinifera

doi:10.16420/j.issn.0513-353x.2018-0842

ACTA HORTICULTURAE SINICA ›› 2019, Vol. 46 ›› Issue (10): 1882-1896.doi: 10.16420/j.issn.0513-353x.2018-0842

• Research Papers • Previous Articles Next Articles

Genome-wide Identification and Expression Analysis of the MADS-box Gene Family in Vitis vinifera

HUANG Xiaojing1，ZHANG Jun1，XIA Hui1,2，DENG Qunxian1，WANG Jin1,2，Lü Xiulan1,2，and LIANG Dong1,2,*

1College of Horticulture，Sichuan Agricultural University，Chengdu 611130，China；2Institute of Pomology and Olericulture，Sichuan Agricultural University，Chengdu 611130，China

Online:2019-10-25 Published:2019-10-25

Abstract

Abstract: A total of 54 MADS-box genes were identified from the grape genome，including 10 Type-Ⅰand 44 Type-Ⅱgenes. All of them distributed on 15 chromosomes，encoded protein sequence was 62–596 amino acids，and the number of exons 1–16 pieces. The promoter region contains a large number of related functional domains such as light signal，plant hormone，stress and meristem. According to the results of qRT-PCR，the expression level of SEP，FUL，FLC，SVP，SOC1 and ANR1 gradually increased with the leaves growth，reaching the highest in mature leaves，then decreased in old leaves；the first fruit expansion period and fruit color change period are the two peak expression stages of SEP，SOC1 and ANR1 subclass genes；hydrogen cyanamide treatment induced the expression of SVP，AGL15，SOC1，AP3/PI，AGL12 and FLC subclass genes to increase continuously during dormancy and decrease during dormancy release.

Key words: grape, MADS-box gene family, gene expression, dormancy, hydrogen cyanamide

CLC Number:

S 663.1

HUANG Xiaojing1，ZHANG Jun1，XIA Hui1,2，DENG Qunxian1，WANG Jin1,2，Lü Xiulan1,2，and LIANG Dong1,2,*. Genome-wide Identification and Expression Analysis of the MADS-box Gene Family in Vitis vinifera[J]. ACTA HORTICULTURAE SINICA, 2019, 46(10): 1882-1896.

[1]	WANG Xiaochen, NIE Ziye, LIU Xianju, DUAN Wei, FAN Peige, and LIANG Zhenchang, . Effects of Abscisic Acid on Monoterpene Synthesis in‘Jingxiangyu’Grape Berries [J]. Acta Horticulturae Sinica, 2023, 50(2): 237-249.
[2]	ZHAI Hanhan, ZHAI Yujie, TIAN Yi, ZHANG Ye, YANG Li, WEN Zhiliang, CHEN Haijiang. Genome-wide Identification of Peach SAUR Gene Family and Characterization of PpSAUR5 Gene [J]. Acta Horticulturae Sinica, 2023, 50(1): 1-14.
[3]	WANG Baoliang, LIU Fengzhi, JI Xiaohao, WANG Xiaodi, SHI Xiangbin, ZHANG Yican, LI Peng, and WANG Haibo. A New Early Ripening Grape Cultivar‘Huapu Zaoyu’for Table [J]. Acta Horticulturae Sinica, 2022, 49(S2): 33-34.
[4]	WANG Baoliang, WANG Haibo, JI Xiaohao, WANG Xiaodi, SHI Xiangbin, WANG Zhiqiang, WANG Xiaolong, and LIU Fengzhi. A New Middle Ripening Grape Cultivar‘Huapu Huangyu’for Table [J]. Acta Horticulturae Sinica, 2022, 49(S2): 35-36.
[5]	A Late-maturing Seedless Grape Cultivar‘Zilongzhu’. A Late-maturing Seedless Grape Cultivar‘Zilongzhu’ [J]. Acta Horticulturae Sinica, 2022, 49(S2): 37-38.
[6]	SHI Xiaoxin, DU Guoqiang, YANG Lili, QIAO Yuelian, HUANG Chengli, WANG Suyue, ZHAO Yuexin, WEI Xiaohui, WANG Li, and QI Xiangli. A Late-ripening Seedless Grape Cultivar‘Hongfeng Wuhe’ [J]. Acta Horticulturae Sinica, 2022, 49(S2): 39-40.
[7]	WU Yueyan, CHEN Tianchi, WANG Liru, HAN Shanqi, and FU Tao. A New Table Grape Cultivar‘Yongzaohong’ [J]. Acta Horticulturae Sinica, 2022, 49(S2): 41-42.
[8]	WANG Xiaoyue, YAN Ailing, ZHANG Guojun, WANG Huiling, REN Jiancheng, LIU Zhenhua, SUN Lei, and XU Haiying, . A New Grape Cultivar‘Ruidu Wanhong’ [J]. Acta Horticulturae Sinica, 2022, 49(S1): 29-30.
[9]	WANG Yongjian, KONG Junhua, FAN Peige, LIANG Zhenchang, JIN Xiuliang, LIU Buchun, DAI Zhanwu. Grape Phenome High-throughput Acquisition and Analysis Methods：A Review [J]. Acta Horticulturae Sinica, 2022, 49(8): 1815-1832.
[10]	ZHANG Qiuyue, LIU Changlai, YU Xiaojing, YANG Jiading, FENG Chaonian. Screening of Reference Genes for Differentially Expressed Genes in Pyrus betulaefolia Plant Under Salt Stress by qRT-PCR [J]. Acta Horticulturae Sinica, 2022, 49(7): 1557-1570.
[11]	WEI Xiaoyu, WANG Yuejin. Correlation Between Anatomical Structure and Resistance to Powdery Mildew in Chinese Wild Vitis Species [J]. Acta Horticulturae Sinica, 2022, 49(6): 1200-1212.
[12]	LIANG Qin, ZHANG Yanhui, KANG Kaiquan, LIU Jinhang, LI Liang, FENG Yu, WANG Chao, YANG Chao, LI Yongyu. Molecular Evolution of MiR168 Family and Their Expression Profiling During Dormancy of Pyrus pyrifolia [J]. Acta Horticulturae Sinica, 2022, 49(5): 958-972.
[13]	LIU Zhongjie, ZHENG Ting, ZHAO Fanggui, FU Weihong, ZHUGE Yaxian, ZHANG Zhichang, FANG Jinggui. Resistance Difference and Physiological Response Mechanism of Grape Rootstocks to Osmotic Stress [J]. Acta Horticulturae Sinica, 2022, 49(5): 984-994.
[14]	LIANG Chen, SUN Ruyi, XIANG Rui, SUN Yimeng, SHI Xiaoxin, DU Guoqiang, WANG Li. Genome-wide Identification of Grape GRF Family and Expression Analysis [J]. Acta Horticulturae Sinica, 2022, 49(5): 995-1007.
[15]	LI Shasha, YU Saisai, FU Yuheng, LUO Qiangwei, XU Yan, WANG Yuejin. The Embryo Rescue and Molecular Markers are Used to Breed New Seedless,Cold-Resistant Grapes [J]. Acta Horticulturae Sinica, 2022, 49(4): 723-738.

Genome-wide Identification and Expression Analysis of the MADS-box Gene Family in Vitis vinifera

PDF

Knowledge

Abstract

Cite this article

share this article

References

Related Articles 15

Recommended Articles

Metrics

Comments