Acta Horticulturae Sinica ›› 2026, Vol. 53 ›› Issue (4): 1143-1156.doi: 10.16420/j.issn.0513-353x.2025-0407
• Genetic & Breeding · Germplasm Resources · Molecular Biology • Previous Articles Next Articles
WANG Ronghua, LIU Shuantao, ZHAO Zhizhong, LI Qiaoyun, XU Nianfang, ZHANG Zhigang, WANG Shubin*(
)
Received:2025-05-09
Revised:2025-09-08
Online:2026-04-25
Published:2026-04-20
Contact:
WANG Shubin
WANG Ronghua, LIU Shuantao, ZHAO Zhizhong, LI Qiaoyun, XU Nianfang, ZHANG Zhigang, WANG Shubin. Identification of the WSD Family Gene in Chinese Cabbage and Expression Analysis Under Drought Stress in Waxy Near-Isogenic Lines[J]. Acta Horticulturae Sinica, 2026, 53(4): 1143-1156.
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URL: https://www.ahs.ac.cn/EN/10.16420/j.issn.0513-353x.2025-0407
| 基因名称Gene | 正向引物(5′-3′)Forward primer sequence | 反向引物(5′-3′)Reverse primer sequence |
|---|---|---|
| BrWSD1 | GCGTAAAACATCGAACCCCG | CACCTCTTGAACCGGCCTTT |
| BrWSD6 | TTGGTCGCTCAACAGTCGTA | ACAATGAGCGCCTGTGGAAA |
| BrWSD8 | CACGGCTGTTCAATTCTCCG | TGCTGGAAAAGCGAGGATGA |
| BrWSD9 | AGCTGTGGCTAGGTTTCACC | ATGCCTCGAGATCGCATGTT |
| BrWSD14 | TTAGCGGTCGATGCAACTGT | TCGTAGAACATCTTGGCCGC |
| BrWSD15 | TCATGAGCTCGACACACGAG | GGCTGAGTCTTCGGGCTATC |
| G6PD | GGGTATGCCAGGACTAAGCTC | GAATCATAAGGGCCACTCACAT |
Table 1 Primer sequences for qRT-PCR analysis
| 基因名称Gene | 正向引物(5′-3′)Forward primer sequence | 反向引物(5′-3′)Reverse primer sequence |
|---|---|---|
| BrWSD1 | GCGTAAAACATCGAACCCCG | CACCTCTTGAACCGGCCTTT |
| BrWSD6 | TTGGTCGCTCAACAGTCGTA | ACAATGAGCGCCTGTGGAAA |
| BrWSD8 | CACGGCTGTTCAATTCTCCG | TGCTGGAAAAGCGAGGATGA |
| BrWSD9 | AGCTGTGGCTAGGTTTCACC | ATGCCTCGAGATCGCATGTT |
| BrWSD14 | TTAGCGGTCGATGCAACTGT | TCGTAGAACATCTTGGCCGC |
| BrWSD15 | TCATGAGCTCGACACACGAG | GGCTGAGTCTTCGGGCTATC |
| G6PD | GGGTATGCCAGGACTAAGCTC | GAATCATAAGGGCCACTCACAT |
| 基因 ID Gene ID | 基因名称 Gene name | 氨基酸数 No. of amino acids | 分子量/kD Molecular weight | 等电点 pI | 不稳定系数 Instability index | 脂肪族氨基酸指数 Aliphatic index | 平均亲水系数 GRAVY | 亚细胞定位 Subcellular localization |
|---|---|---|---|---|---|---|---|---|
| BraA01g024150 | BrWSD1 | 511 | 57.93 | 9.15 | 43.60 | 93.48 | -0.221 | 细胞质 Cytoplasm |
| BraA01g024160 | BrWSD2 | 484 | 54.76 | 8.42 | 53.67 | 92.85 | -0.165 | 细胞质 Cytoplasm |
| BraA02g004570 | BrWSD3 | 467 | 52.32 | 9.04 | 44.20 | 97.69 | -0.032 | 质膜 Plasma membrane |
| BraA02g015030 | BrWSD4 | 482 | 54.48 | 9.17 | 37.41 | 98.03 | -0.043 | 质膜 Plasma membrane |
| BraA02g021490 | BrWSD5 | 477 | 53.47 | 8.71 | 43.47 | 101.13 | 0.105 | 细胞质 Cytoplasm |
| BraA02g021510 | BrWSD6 | 478 | 53.73 | 8.33 | 45.92 | 105.75 | 0.110 | 细胞质 Cytoplasm |
| BraA03g005460 | BrWSD7 | 474 | 53.30 | 8.96 | 37.91 | 89.45 | -0.184 | 叶绿体 Chloroplast |
| BraA03g014460 | BrWSD8 | 490 | 55.38 | 9.27 | 34.21 | 98.39 | -0.009 | 质膜 Plasma membrane |
| BraA03g018490 | BrWSD9 | 418 | 46.72 | 8.01 | 36.77 | 102.54 | 0.178 | 叶绿体 Chloroplast |
| BraA03g020550 | BrWSD10 | 484 | 54.34 | 8.97 | 30.38 | 95.39 | -0.068 | 叶绿体 Chloroplast |
| BraA03g020560 | BrWSD11 | 476 | 53.94 | 9.08 | 30.01 | 97.00 | -0.020 | 细胞质 Cytoplasm |
| BraA03g066590 | BrWSD12 | 479 | 53.46 | 7.67 | 35.73 | 100.71 | 0.062 | 细胞质 Cytoplasm |
| BraA04g016040 | BrWSD13 | 460 | 51.16 | 8.82 | 35.87 | 100.48 | 0.038 | 细胞质 Cytoplasm |
| BraA04g031560 | BrWSD14 | 418 | 47.14 | 6.43 | 50.12 | 86.89 | -0.261 | 叶绿体 Chloroplast |
| BraA05g015270 | BrWSD15 | 543 | 61.54 | 9.46 | 37.74 | 92.49 | -0.137 | 细胞质 Cytoplasm |
| BraA06g018340 | BrWSD16 | 554 | 62.86 | 9.58 | 41.22 | 94.46 | -0.225 | 细胞质 Cytoplasm |
| BraA06g025960 | BrWSD17 | 415 | 46.57 | 6.74 | 42.54 | 90.70 | -0.275 | 细胞核 Nuclear |
| BraA10g011970 | BrWSD18 | 461 | 50.79 | 7.72 | 40.58 | 109.76 | 0.068 | 质膜 Plasma membrane |
Table 2 Physicochemical properties and subcellular localization prediction of WSD proteins in Brassica rapa
| 基因 ID Gene ID | 基因名称 Gene name | 氨基酸数 No. of amino acids | 分子量/kD Molecular weight | 等电点 pI | 不稳定系数 Instability index | 脂肪族氨基酸指数 Aliphatic index | 平均亲水系数 GRAVY | 亚细胞定位 Subcellular localization |
|---|---|---|---|---|---|---|---|---|
| BraA01g024150 | BrWSD1 | 511 | 57.93 | 9.15 | 43.60 | 93.48 | -0.221 | 细胞质 Cytoplasm |
| BraA01g024160 | BrWSD2 | 484 | 54.76 | 8.42 | 53.67 | 92.85 | -0.165 | 细胞质 Cytoplasm |
| BraA02g004570 | BrWSD3 | 467 | 52.32 | 9.04 | 44.20 | 97.69 | -0.032 | 质膜 Plasma membrane |
| BraA02g015030 | BrWSD4 | 482 | 54.48 | 9.17 | 37.41 | 98.03 | -0.043 | 质膜 Plasma membrane |
| BraA02g021490 | BrWSD5 | 477 | 53.47 | 8.71 | 43.47 | 101.13 | 0.105 | 细胞质 Cytoplasm |
| BraA02g021510 | BrWSD6 | 478 | 53.73 | 8.33 | 45.92 | 105.75 | 0.110 | 细胞质 Cytoplasm |
| BraA03g005460 | BrWSD7 | 474 | 53.30 | 8.96 | 37.91 | 89.45 | -0.184 | 叶绿体 Chloroplast |
| BraA03g014460 | BrWSD8 | 490 | 55.38 | 9.27 | 34.21 | 98.39 | -0.009 | 质膜 Plasma membrane |
| BraA03g018490 | BrWSD9 | 418 | 46.72 | 8.01 | 36.77 | 102.54 | 0.178 | 叶绿体 Chloroplast |
| BraA03g020550 | BrWSD10 | 484 | 54.34 | 8.97 | 30.38 | 95.39 | -0.068 | 叶绿体 Chloroplast |
| BraA03g020560 | BrWSD11 | 476 | 53.94 | 9.08 | 30.01 | 97.00 | -0.020 | 细胞质 Cytoplasm |
| BraA03g066590 | BrWSD12 | 479 | 53.46 | 7.67 | 35.73 | 100.71 | 0.062 | 细胞质 Cytoplasm |
| BraA04g016040 | BrWSD13 | 460 | 51.16 | 8.82 | 35.87 | 100.48 | 0.038 | 细胞质 Cytoplasm |
| BraA04g031560 | BrWSD14 | 418 | 47.14 | 6.43 | 50.12 | 86.89 | -0.261 | 叶绿体 Chloroplast |
| BraA05g015270 | BrWSD15 | 543 | 61.54 | 9.46 | 37.74 | 92.49 | -0.137 | 细胞质 Cytoplasm |
| BraA06g018340 | BrWSD16 | 554 | 62.86 | 9.58 | 41.22 | 94.46 | -0.225 | 细胞质 Cytoplasm |
| BraA06g025960 | BrWSD17 | 415 | 46.57 | 6.74 | 42.54 | 90.70 | -0.275 | 细胞核 Nuclear |
| BraA10g011970 | BrWSD18 | 461 | 50.79 | 7.72 | 40.58 | 109.76 | 0.068 | 质膜 Plasma membrane |
Fig. 4 Phylogenetic tree analysis of WSD proteins in Brassica rapa,Arabidopsis thaliana,Brassica oleracea and Brassica napus The numbers represent the statistical confidence of the branch
Fig. 9 WSD genes expression analysis in Brassica rapa waxy near isogenic lines under drought stress Different lowercase letters indicate significant differences among different treatments(P < 0.05,n = 3)
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