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园艺学报 ›› 2020, Vol. 47 ›› Issue (11): 2215-2222.doi: 10.16420/j.issn.0513-353x.2020-0033

• 新技术与新方法 • 上一篇    下一篇

柑橘叶斑驳病毒的RT-LAMP检测

黄爱军*,丁 敏,王 莹,苏华楠,易 龙   

  1. 赣南师范大学生命科学学院,国家脐橙工程技术研究中心,江西赣州 341000
  • 出版日期:2020-11-25 发布日期:2020-12-07
  • 基金资助:
    江西省重点研发计划项目(20161ACF60016);江西省现代农业产业技术体系建设专项资金项目(JXARS-07);赣南师范大学研究生创新专项(YCX19A023);赣州市科技创新人才计划项目([2018]50)

Establishment of RT-LAMP Assay for Detection of Citrus Leaf Blotch Virus

HUANG Aijun*,DING Min,WANG Ying,SU Huanan,and YI Long   

  1. College of Life Sciences,Gannan Normal University,National Navel Orange Engineering Research Center,Ganzhou,Jiangxi 341000,China
  • Online:2020-11-25 Published:2020-12-07

摘要: 建立了柑橘叶斑驳病毒(citrus leaf blotch virus,CLBV)的RT-LAMP(Reverse transcription loop-mediated isothermal amplification)检测方法,并对其灵敏度和准确性进行验证。根据CLBV的外壳蛋白序列设计引物,筛选出特异性较好的一组引物,进行扩增时间及温度等条件优化。优化后反应体系可在65 ℃条件下,60 min内完成扩增。所建立体系特异性好,灵敏度高,最低可从23.2 pg • µL-1的模板中检测出CLBV,扩增结果可通过加入SYBR greenⅠ染料方法直接观察。用RT-LAMP方法对田间采集的120份柑橘样品进行检测,不同来源样品检出率在0 ~ 15%之间,与普通RT-PCR方法检出结果一致。

关键词: 柑橘, 柑橘叶斑驳病毒, 环介导等温核酸扩增技术

Abstract: This study aim of is to establishe the detection method of reverse transcription loop-mediated isothermal amplification(RT-LAMP)method for visual detection of CLBV,and validate its sensitivity and accuracy. The primers were designed and screened based on the conserved region of coat protein gene of CLBV. The reaction conditions of the RT-LAMP,including amplification temperature and amplification time were optimized. The optimized RT-LAMP can be done at 65 ℃ within 60 min. The detection limits of the RT-LAMP was 23.2 pg • µL-1. When the SYBR greenⅠdye was added to the amplification product,the positive samples were observed visually to be green,whereas the negative samples were orange,and there is no need for gel electrophoresis analysis. The eastablished RT-LAMP was used to detect CLBV from 120 field samples. The detection rate of different source samples was between 0 and 15%,the result of the RT-LAMP was in accord with RT-PCR method.

Key words: citrus, citrus leaf blotch virus, LAMP

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