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园艺学报 ›› 2006, Vol. 33 ›› Issue (2): 249-254.

• 研究论文 • 上一篇    下一篇

利用DNA扩增片段序列对樱桃种质资源的遗传分析

蔡宇良1, 2;李 珊3;曹东伟1;钱增强1;赵桂仿1*;韩明玉2
  

  1. (1西北大学生命科学学院, 西安710069; 2西北农林科技大学园艺学院, 杨凌712100; 3同济大学生命科学与技术学院, 上海200092)
  • 收稿日期:2005-08-11 修回日期:2005-12-16 出版日期:2006-04-25 发布日期:2006-04-25

Use of Amplified DNA Sequences for the Genetic Analysis of the Cherry Germplasm

Cai Yuliang1, 2; Li Shan3;Cao Dongwei1;Qian Zengqiang1;Zhao Guifang1*;HanMingyu2   

  1. (1 School of Life Science, Northwest University, X i'an 710069, China; 2College of Horticulture, Northwest A & F University, Yangling 712100, China; 3College of Life Science and Technology, Tongji University, Shanghai 200092, China)
  • Received:2005-08-11 Revised:2005-12-16 Online:2006-04-25 Published:2006-04-25

摘要: 从130个任意寡核苷酸引物中筛选出48个引物, 对8个樱桃种及2个种间杂交种的总DNA进行PCR扩增, 产生的多态性用于遗传分析。利用两种距离法进行系统发育分析, 并构建出种间及品种间亲缘关系的聚类图。结果表明, 扩增位点总数为840个; 23个甜樱桃品种及4个酸樱桃品种各自聚为一类, 多态位点数分别为569和247个, 多态位点百分率分别为67.74%和29.40%。毛樱桃、草原樱桃(变种) 与欧李聚为单一组群; 中国樱桃与寇尔特亲缘关系较近, 聚为另一单一组; 甜樱桃、酸樱桃等其他种在亲缘关系上分歧较大; 樱桃种群间的遗传距离在0.0623 ~ 0.2719之间, 并且从分子水平上可以鉴别。聚类图聚类分析结果总体上与李属分类标准相一致。除甜樱桃‘红灯’品种外, 均扩增出了1个以上的特有RAPD标记, 据此可以进行品种鉴定或杂种优良性状预选。

关键词: 樱桃, RAPD, 种, 品种鉴定, 亲缘关系

Abstract: A PCR method using arbitrary oligonucleotide primers and totalDNA was employed to analyze cherry germplasm polymorphisms. Out of 130 primers, 48 10-mer primerswere selected and 8 cherry species and 2 interspecific progenies were analyzed. The phylogenetic analysis was carried out using two distance-matrix methods and a dendrogram was generated to show the relationships among species and cultivars. The results showed that there were 840 amplified loci in total; 23 sweet cherry and 4 sour cherry cultivars were clustered together with 569 and 247 polymorphic loci respectively which ccounted for 67.74% and 29.40% of the total variation. Prunus tomentosa T. , P. fruticosa var. aucta P. and P. humilis B. formed a monophyletic group. A close relationship between P. pseudocerasus L. and Colt, which formed another closely related group, was observed while P. avium L. , P. cerasus L. and other cherry species were more divergent. The range of genetic distances was from 0.0623 to 0.2719 among Prunus species, which were genetically distinct. The topology of the tree was generally in agreement with taxonomical classification of Prunus. The results indicated that except sweet cherry‘Hongdeng’variety there were one ormore cultivar-specific RAPD markers in cherry species and cultivars. Using these specific markers, cherry species and varieties could be identified and good characteristics of hybrids could be selected early.

Key words: Cherry, RAPD, Species, Cultivar identification, Genetic relationship