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园艺学报 ›› 2014, Vol. 41 ›› Issue (11): 2342-2352.

• 新方法 • 上一篇    下一篇

高质量提取柑橘样品中病原总核酸方法的建立

苏华楠1,2,3,王雪峰2,黄爱军1,2,李中安2,唐科志2,周常勇1,2,*   

  1. 1西南大学植物保护学院,重庆 400715;2中国农业科学院柑桔研究所,重庆 400712;3赣南师范学院,国家脐橙工程技术研究中心,江西赣州 341000
  • 收稿日期:2014-07-18 出版日期:2014-11-25 发布日期:2014-11-25
  • 基金资助:

    公益性行业(农业)科研专项(201003067,2010-2014);重庆市自然科学基金项目(cstc2012jjA80025);重庆市两江学者项目(2013)

High Quality Total Nucleic Acid Extraction Method from Citrus for Disease Detection

SU Hua-nan1,2,3,WANG Xue-feng2,HUANG Ai-jun1,2,LI Zhong-an2,TANG Ke-zhi2,and ZHOU Chang-yong1,2,*   

  1. 1College of Plant Protection,Southwest University,Chongqing 400715,China;2Citrus Research Institute,Chinese Academy of Agricultural Sciences/Southwest University,Chongqing 400712,China;3National Navel Orange Engineering and Technology Research Center,Gannan Normal University,Ganzhou,Jiangxi 341000,China
  • Received:2014-07-18 Online:2014-11-25 Published:2014-11-25

摘要: 针对柑橘老熟组织中富含多糖、多酚、色素和其它次生代谢产物的特点,以柑橘老叶老皮为试材,在传统CTAB提取法的基础上通过添加增效剂并优化配方,建立了一种快速、简便的提取植物老熟组织及其内部病原总核酸的CTAB-Triton提取法。新的提取液对细胞的裂解能力更强,且解决了传统CTAB溶液因低温析出而致DNA得率损失的弊端。比较了该法和微量葡聚糖柱纯化法制备模板时韧皮部杆菌的检出率,并用该法制备模板,分析了韧皮部杆菌在柚子叶片中的分布情况,及对其它几种柑橘病原菌进行PCR/RT-PCR检测。结果表明,CTAB-Triton方法能有效提取柑橘老熟叶片的DNA,所得DNA质量高,产量比商品化试剂盒大,提高了韧皮部杆菌的检出率,且可用于柑橘其他病原真菌、细菌,以及DNA或RNA病毒病害的PCR/RT-PCR检测,也可用于定量PCR检测和病原种群多态性分析。

关键词: 柑橘, 韧皮部杆菌, 柑橘黄龙病, DNA提取, 柑橘病害检测

Abstract: The presence of high concentrations of polysaccharides,polyphenols,pigment,and other secondary metabolites in mature citrus leaves is big challenging to obtain high quality DNA/RNA for citrus disease research. In this study,a reliable,fast and enhanced total nucleic acid extraction protocol(CTAB-Triton),modified from the cetyltrimethylammonium bromide(CTAB)method,was established for DNA extraction of mature citrus tissues. The novel extraction buffer was superior to traditional buffer in cell lysis,and avoided low yield due to CTAB-DNA co-precipitation when temperature was lower than 15 ℃. Meanwhile,good-quality DNA and higher DNA yield were obtained through this extraction method,comparing with the commercial DNA isolation kits. The infection rate of‘Candidatus Liberibacter asiaticus’(CLas)extracted by CTAB-Triton and Sephadex G-50 extraction method was compared,CTAB-Triton method significantly improved the detection rate. SYBR Green-based quantitative PCR(qPCR)assay was performed to compare the concentration of CLas within different parts of pummelo leaves. This new method was also suitable for the extraction of citrus fungi,bacteria,and DNA/RNA viral diseases for the pathogen detection and genetic diversity analysis.

Key words: citrus, ‘Candidatus Liberibacter asiaticus’, huanglongbing, DNA extraction, citrus disease detection

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