园艺学报 ›› 2025, Vol. 52 ›› Issue (7): 1883-1900.doi: 10.16420/j.issn.0513-353x.2024-0667
祝兴喆1,*, 苏仙月1,*, 苏旺2, 张红林1, 潘哲超3, 刘涛1, 徐笑宇1,**()
收稿日期:
2024-10-07
修回日期:
2025-04-18
出版日期:
2025-07-23
发布日期:
2025-07-23
通讯作者:
作者简介:
基金资助:
ZHU Xingzhe1, SU Xianyue1, SU Wang2, ZHANG Honglin1, PAN Zhechao3, LIU Tao1, and XU Xiaoyu1,**()
Received:
2024-10-07
Revised:
2025-04-18
Published:
2025-07-23
Online:
2025-07-23
摘要: 为探究云南省冬(W)、春(S)种植模式下生境差异对不同基因型马铃薯叶片糖苷生物碱(steroidal glycoalkaoids,SGA)合成代谢的影响,以青薯9号(Q9)和丽薯6号(L6)为材料,通过比较蛋白质组学和代谢组学联合分析技术,分析了这两个品种在冬春季节种植期间,处于块茎关键生长时期时叶片中的SGA代谢变化。结果表明:(1)SGA的含量在叶片中随着块茎的发育成熟总体呈上升趋势,但在块茎膨大期中的合成差异最为明显,因此,选择这一时期的叶片开展了基于两种比较模式(Q9-leafW vs. Q9-leafS;Q9-leafW vs. L6-leafW)的组学分析;(2)因品种基因型差异和种植模式引起的生境条件改变,从整体蛋白质表达调控及其导致的代谢物重分配水平上,对马铃薯叶片在两种比较模式下的全局代谢分化造成了初生和次生层面的显著影响;(3)在两种比较模式中分别鉴定到了4个与SGA生物合成高度相关的差异表达蛋白质和差异积累代谢物,它们在SGA生物合成路径的初级和次级代谢阶段中发挥了调控SGA合成积累的不同作用,这可能是引起叶片总SGA在含量和组分上显著差异的关键原因。
祝兴喆, 苏仙月, 苏旺, 张红林, 潘哲超, 刘涛, 徐笑宇. 两个马铃薯品种冬、春种植模式下叶片糖苷生物碱合成代谢差异分析[J]. 园艺学报, 2025, 52(7): 1883-1900.
ZHU Xingzhe, SU Xianyue, SU Wang, ZHANG Honglin, PAN Zhechao, LIU Tao, and XU Xiaoyu. Understanding the Anabolic Differences of Steroidal Glycoalkaloids in Leaf Between Two Potato Varieties Grown at the Winter and Spring Cropping Patterns[J]. Acta Horticulturae Sinica, 2025, 52(7): 1883-1900.
图1 冬、春种植模式下马铃薯叶片(A)和块茎(B)中SGA的含量变化 S1:块茎形成期(30 ~ 50 d);S2:块茎膨大期(60 ~ 80 d);S3:块茎成熟期(90 ~ 110 d);LSD检验,不同小写字母表示差异显著(P < 0.05)
Fig. 1 SGAs contents variation of potato leaves(A)and tubers(B)under the winter and spring cropping patterns S1:Tuber formation stage(30 ~ 50 d);S2:Tuber enlargement stage(60 ~ 80 d);S3:Tuber maturity stage(90 ~ 110 d).LSD test,different lowercase letters indicate significantly difference(P < 0.05)
类别 Category | 可溶性糖/ (mg · g-1 DW) Soluble sugar | 还原性总糖/ (mg · g-1 DW) Total reducing sugar | 水溶性蛋白质/ (mg · g-1 DW) Water-soluble protein | 总淀粉含量/ (% DW) Total starch content | 直链淀粉含量/ (%DW) Amylose content | 维生素C含量/ (nmol · g-1 FW) Vitamin C content |
---|---|---|---|---|---|---|
Q9(S) | 4.50 b | 1.51 b | 3.59 c | 19.62 a | 7.02 a | 673.87 b |
Q9(W) | 3.86 a | 0.70 c | 6.49 a | 18.81 a | 6.27 a | 936.83 a |
L6(S) | 8.31 a | 2.66 a | 5.38 b | 12.16 c | 3.92 b | 808.02 b |
L6(W) | 8.26 a | 2.06 b | 4.12 c | 14.12 b | 4.71 b | 1104.46 a |
表1 S3期马铃薯块茎主要可溶性固形物和维生素C含量
Table 1 Content of major carbohydrates and vitamin C in potato tubers at the S3 stage
类别 Category | 可溶性糖/ (mg · g-1 DW) Soluble sugar | 还原性总糖/ (mg · g-1 DW) Total reducing sugar | 水溶性蛋白质/ (mg · g-1 DW) Water-soluble protein | 总淀粉含量/ (% DW) Total starch content | 直链淀粉含量/ (%DW) Amylose content | 维生素C含量/ (nmol · g-1 FW) Vitamin C content |
---|---|---|---|---|---|---|
Q9(S) | 4.50 b | 1.51 b | 3.59 c | 19.62 a | 7.02 a | 673.87 b |
Q9(W) | 3.86 a | 0.70 c | 6.49 a | 18.81 a | 6.27 a | 936.83 a |
L6(S) | 8.31 a | 2.66 a | 5.38 b | 12.16 c | 3.92 b | 808.02 b |
L6(W) | 8.26 a | 2.06 b | 4.12 c | 14.12 b | 4.71 b | 1104.46 a |
图2 冬、春种植模式下S2时期马铃薯叶片的比较蛋白质组学分析 A、B:Q9-leafW vs. Q9-leafS和Q9-leafW vs. L6-leafW中DEP的表达聚类热图;C、D:GO(Gene Ontology)分析;E:KEGG(Kyoto Encyclopedia of Genes and Genomes)分析(Top 20)
Fig. 2 Comparative proteomic analysis of potato leaves at the S2 stage under the W and S cropping patterns A,B:Heat map visualization of the expression and clustering of DEP under the Q9-leafW vs. Q9-leafS and Q9-leafW vs. L6-leafW comparison modes;C,D:GO(Gene Ontology)analysis;E:KEGG(Kyoto Encyclopedia of Genes and Genomes)analysis(Top 20)
亚细胞定位Subcellular localization | 蛋白数量Number of proteins | 亚细胞定位Subcellular localization | 蛋白数量Number of proteins | ||
---|---|---|---|---|---|
Q9-leafW vs. Q9-leafS | Q9-leafW vs. L6-leafW | Q9-leafW vs. Q9-leafS | Q9-leafW vs. L6-leafW | ||
液泡Vacuole | 14 | 13 | 膜Membrane | 94 | 45 |
单代膜蛋白Single-pass membrane protein | 3 | 1 | 多通道膜蛋白Multi-pass membrane protein | 79 | 35 |
分泌蛋白Secreted protein | 27 | 17 | 细胞质Cytoplasm | 17 | 8 |
质体Plastid | 48 | 28 | 基质侧Stromal side | 1 | - |
细胞核Nucleus | 10 | 11 | 高尔基体膜Golgi apparatus membrane | 2 | - |
线粒体内膜Mitochondrion inner membrane | 3 | 2 | 单通道 II 型膜蛋白Single-pass type II membrane protein | 1 | - |
管腔侧Lumenal side | 1 | 1 | 质体膜Plastid membrane | 3 | - |
脂锚定蛋白Lipid-anchor | 2 | 4 | 核仁Nucleolus | 2 | - |
膜间隙Intermembrane side | 1 | 2 | 基质蛋白侧Matrix side | 1 | - |
糖基磷脂酰肌醇锚定蛋白GPI-anchor | 2 | 4 | 单通道IV 型膜蛋白Single-pass type IV membrane protein | 2 | - |
高尔基体Golgi apparatus | 5 | 2 | 乙醛酸循环体Glyoxysome | 1 | - |
细胞外空间Extracellular space | 8 | 4 | 内生体膜Endosome membrane | 1 | - |
内质网膜Extracellular space | 2 | 1 | 衣被凹陷Coated pit | 1 | - |
内质网Endoplasmic reticulum | 1 | 1 | 胞质小泡Cytoplasmic vesicle | 1 | - |
胞质Cytosol | 2 | 1 | 胞质侧Cytoplasmic side | 2 | - |
染色体Chromosome | 2 | 2 | 细胞质Cytoplasm | 17 | - |
叶绿体类囊体膜Chloroplast thylakoid membrane | 27 | 13 | 包衣小泡膜COPII-coated vesicle membrane | 1 | - |
叶绿体类囊体管腔Chloroplast Thylakoidlumen | 3 | 3 | 胞质小泡膜Cytoplasmic vesicle membrane | 1 | - |
叶绿体类囊体Chloroplast thylakoid | 1 | 1 | 顺面高尔基网Cis-Golgi network | 1 | - |
叶绿体基质Chloroplast stroma | 1 | 1 | 叶绿体膜Chloroplast membrane | 3 | - |
叶绿体被膜Chloroplast envelope | 1 | 1 | 叶绿体内膜Chloroplast inner membran | 1 | - |
叶绿体Chloroplast | 12 | 9 | 细胞膜Cell membrane | 7 | 9 |
细胞壁Cell wall | 10 | 5 | 胞间连丝Plasmodesma | - | 1 |
单通道 I 型膜蛋白Single-pass type I membrane protein | - | 2 | 线粒体外模Mitochondrion outer membrane | - | 1 |
质外体Apoplast | 7 | 4 | 线粒体Mitochondrion | - | 1 |
造粉体Amyloplast | 2 | 2 | 细胞骨架Cytoskeleton | - | 1 |
过氧物酶体Peroxisome | 3 | 2 | 细胞连接Cell junction | - | 1 |
外周膜蛋白Peripheral membrane protein | 9 | 6 | 单通道II型膜蛋白Single-pass type II membrane protein | 1 | - |
表2 DEP的亚细胞定位分析
Table 2 Subcellular localization analysis of DEP
亚细胞定位Subcellular localization | 蛋白数量Number of proteins | 亚细胞定位Subcellular localization | 蛋白数量Number of proteins | ||
---|---|---|---|---|---|
Q9-leafW vs. Q9-leafS | Q9-leafW vs. L6-leafW | Q9-leafW vs. Q9-leafS | Q9-leafW vs. L6-leafW | ||
液泡Vacuole | 14 | 13 | 膜Membrane | 94 | 45 |
单代膜蛋白Single-pass membrane protein | 3 | 1 | 多通道膜蛋白Multi-pass membrane protein | 79 | 35 |
分泌蛋白Secreted protein | 27 | 17 | 细胞质Cytoplasm | 17 | 8 |
质体Plastid | 48 | 28 | 基质侧Stromal side | 1 | - |
细胞核Nucleus | 10 | 11 | 高尔基体膜Golgi apparatus membrane | 2 | - |
线粒体内膜Mitochondrion inner membrane | 3 | 2 | 单通道 II 型膜蛋白Single-pass type II membrane protein | 1 | - |
管腔侧Lumenal side | 1 | 1 | 质体膜Plastid membrane | 3 | - |
脂锚定蛋白Lipid-anchor | 2 | 4 | 核仁Nucleolus | 2 | - |
膜间隙Intermembrane side | 1 | 2 | 基质蛋白侧Matrix side | 1 | - |
糖基磷脂酰肌醇锚定蛋白GPI-anchor | 2 | 4 | 单通道IV 型膜蛋白Single-pass type IV membrane protein | 2 | - |
高尔基体Golgi apparatus | 5 | 2 | 乙醛酸循环体Glyoxysome | 1 | - |
细胞外空间Extracellular space | 8 | 4 | 内生体膜Endosome membrane | 1 | - |
内质网膜Extracellular space | 2 | 1 | 衣被凹陷Coated pit | 1 | - |
内质网Endoplasmic reticulum | 1 | 1 | 胞质小泡Cytoplasmic vesicle | 1 | - |
胞质Cytosol | 2 | 1 | 胞质侧Cytoplasmic side | 2 | - |
染色体Chromosome | 2 | 2 | 细胞质Cytoplasm | 17 | - |
叶绿体类囊体膜Chloroplast thylakoid membrane | 27 | 13 | 包衣小泡膜COPII-coated vesicle membrane | 1 | - |
叶绿体类囊体管腔Chloroplast Thylakoidlumen | 3 | 3 | 胞质小泡膜Cytoplasmic vesicle membrane | 1 | - |
叶绿体类囊体Chloroplast thylakoid | 1 | 1 | 顺面高尔基网Cis-Golgi network | 1 | - |
叶绿体基质Chloroplast stroma | 1 | 1 | 叶绿体膜Chloroplast membrane | 3 | - |
叶绿体被膜Chloroplast envelope | 1 | 1 | 叶绿体内膜Chloroplast inner membran | 1 | - |
叶绿体Chloroplast | 12 | 9 | 细胞膜Cell membrane | 7 | 9 |
细胞壁Cell wall | 10 | 5 | 胞间连丝Plasmodesma | - | 1 |
单通道 I 型膜蛋白Single-pass type I membrane protein | - | 2 | 线粒体外模Mitochondrion outer membrane | - | 1 |
质外体Apoplast | 7 | 4 | 线粒体Mitochondrion | - | 1 |
造粉体Amyloplast | 2 | 2 | 细胞骨架Cytoskeleton | - | 1 |
过氧物酶体Peroxisome | 3 | 2 | 细胞连接Cell junction | - | 1 |
外周膜蛋白Peripheral membrane protein | 9 | 6 | 单通道II型膜蛋白Single-pass type II membrane protein | 1 | - |
图3 冬、春种植模式下S2期马铃薯叶片的比较代谢组学分析 A:Q9-leafW vs. Q9-leafS的代谢物火山图;B:Q9-leafW vs. L6-leafW的代谢物火山图;C:2种比较模式中主要DAM的热图。火山图从左往右依次为在正、负离子质谱条件下检测到的结果,图中左、右两侧的彩色圆圈分别代表上、下调的物质及其所属类别,下部的黑色圆圈则代表无显著性差异的物质
Fig. 3 Comparative metabolomics analysis of potato leaves at the S2 stage under the W and S cropping patterns A:Volcano map of metabolites in Q9-leafW vs. Q9-leafS;B:Volcano map of metabolites in Q9-leafW vs. L6-leafW;C:Heat map visualization analysis of major DAM in the two comparison modes. From left to right,the volcano maps demonstrate the results of the mass spectrometry detection under the positive and negative ion conditions. The colored circles on the left and right sides of the map represent the up- and down-regulated substances and their categories,respectively,while the black circles at the bottom represent substances with no significant difference
代谢物的名称与分类The nomenclature and classification of metabolites | 表达量倍数差异Fold difference in expression | |
---|---|---|
Q9-leafW vs. Q9-leafS | Q9-leafW vs. L6-leafW | |
SGAs生物合成相关的物质(6) Substances related to biosynthesis of SGAs(6) | ||
7-酮基胆固醇 7-Ketocholesterol | 0.19 | 1.24 |
番茄碱 Tomatidine | 8.07 | 5.98 |
茄啶 Solanidine | -0.69 | -1.47 |
β-茄碱 beta-Solanine | 3.44 | 4.44 |
α-茄碱 alpha-Solanine | -5.06 | -4.06 |
α-卡茄碱 alpha-Chaconine | -0.34 | -1.03 |
脂类物质(18) lipid(18) | ||
单硬脂酸甘油酯 Glyceryl monostearate | -1.60 | - |
2-棕榈酰甘油 2-Palmitoylglycerol | -1.29 | - |
(1R,2S,4R,5R)-5-羟基-1,7,7-三甲基双环[2.2.1]庚-2-基6-O-[(2R,3R,4R)-四氢-3,4-二羟基-4-(羟甲基)-2-呋喃基]-β-D-吡喃葡萄糖苷 (1R,2S,4R,5R)-5-Hydroxy-1,7,7-trimethylbicyclo[2.2.1]hept-2-yl6-O-[(2R,3R,4R)-tetrahydro-3,4-dihydroxy-4-(hydroxymethyl)-2-furanyl]-β-D-glucopyranoside | -2.84 | - |
4,4,8,10,14-五甲基-17-(4,5,6-三羟基-6-甲基庚烷-2-基)-2,5,6,7,9,15-六氢-1H-环戊二烯[a]菲-3,16-二酮 4,4,8,10,14-Pentamethyl-17-(4,5,6-trihydroxy-6-methylheptan-2-yl)-2,5,6,7,9,15-hexahydro-1H-cyclopenta[a]phenanthrene-3,16-dione | -2.74 | - |
芥酸酰胺 Erucamide | -2.18 | - |
叶黄素 Lutein | -1.40 | - |
贝母甲素 Peimine | - | -1.18 |
3,5,5-三甲基-4-[3-[(6-O-β-D-木吡喃糖基-β-D-吡喃葡萄糖基)氧]丁基]-2-环己烯-1-酮 3,5,5-Trimethyl-4-[3-[(6-O-β-D-xylopyranosyl-β-D-glucopyranosyl)oxy]butyl]-2-cyclohexen-1-one | - | 1.33 |
9S-羟基-10E,12Z,15Z-十八碳三烯酸 9-HOTrE | 3.43 | - |
十八碳四烯酸 FA 18︰4 | 3.17 | - |
9,12,13-三羟基十八碳-10,15-二烯酸9,12,13-Trihydroxyoctadeca-10,15-dienoic acid | 1.32 | - |
乳糖醇 Lactitol | 4.40 | - |
脂肪酸 Sebacic acid | 3.47 | - |
16-羟基棕榈酸 FA 16︰0;2O | 4.49 | - |
(S)-2-羟基-2-甲基琥珀酸 (S)-2-Hydroxy-2-methylsuccinic acid | - | 3.17 |
12,13-二羟基十八烷基-9-烯酸 12,13-Dihydroxyoctadec-9-enoic acid | - | 2.26 |
(Z)-5,8,11-三羟基十八烷基-9-烯酸 (Z)-5,8,11-Trihydroxyoctadec-9-enoic acid | - | 1.24 |
十八碳二烯四氧酸 FA 18:2;4O | - | -1.00 |
有机氧化物(11) Organic oxide(11) | ||
蔗糖 Sucrose | - | -1.69 |
苯乙基-2-O-(β-D-吡喃木糖基)-β-D-吡喃葡萄糖苷Phenethyl2-O-(β-D-xylopyranosyl)-β-D-glucopyranoside | - | -1.22 |
苯甲醇 + 己烷 Benzyl alcohol + Hex-Pen | -1.84 | - |
决奈达隆 Dronedarone | 3.86 | - |
苯甲醇 + 己烷 Benzyl alcohol + Hex-Hex | -2.00 | - |
(2S,3S,4S,5R,6R)-6-(3-苯甲酰氧基-2-羟基丙氧基)-3,4,5-三羟基氧烷-2-羧酸 (2S,3S,4S,5R,6R)-6-(3-benzoyloxy-2-hydroxypropoxy)-3,4,5-trihydroxyoxane-2-carboxylic acid | - | 3.97 |
3-O-阿魏酰奎尼酸 3-O-Feruloylquinic acid | - | 1.58 |
红景天苷 Salidroside | - | 3.16 |
山梨醇 Sorbo | - | 4.64 |
乳酮糖 Lactulose | - | -1.79 |
红霉素 Erythromycin | - | -2.18 |
苯丙类和聚酮类物质(9) Phenylpropyl and polyketone substances(9) | ||
8,8-二甲基-2-苯基-4H,8-H-苯并[1,2-b:3,4-b’]二吡喃-4-酮 8,8-Dimethyl-2-phenyl-4H,8H-benzo[1,2-b:3,4-b’]dipyran-4-one | 1.60 | - |
黄芩苷II Scutellarioside II | -1.74 | - |
山奈酚 Kaempferol | -3.64 | - |
阿魏酰-O-甲氧基酪胺 Feruloyl O-methyldopamine | 4.21 | - |
(S)-7-(2-O-6-脱氧-α-L-甘露糖基)-β-D-吡喃葡萄糖基)-2,3-二氢-5-羟基-2-(3-羟基-4-甲氧基苯基)-4H-1-苯并吡喃-4-酮 (S)-7-(2-O-6-Deoxy-α-L-mannopyranosyl)-β-D-glucopyranosyl) oxy)-2,3-dihydro-5-hydroxy-2-(3-hydroxy-4-methoxyphenyl)-4H-1-benzopyran-4-one | - | -1.15 |
3-(4-羟基-3-甲氧基苯基)-2-丙烯酸 3-(4-Hydroxy-3-methoxyphenyl)-2-propenoic acid | - | 4.45 |
芦丁 Rutin | - | 1.58 |
(+/-)-木脂酰胺 (+/-)-Grossamide | - | 3.62 |
秦皮甲素 Esculin | - | -1.12 |
有机杂环化合物(6) Organic Heterocyclic Compounds(6) | ||
(3R,4R,5R)-3-[(11E)-11,15-十六碳二烯-9-炔-1-基]-4-羟基-5-甲基二氢-2(3H)-呋喃酮 (3R,4R,5R)-3-[(11E)-11,15-Hexadecadien-9-yn-1-yl]-4-hydroxy-5-methyldihydro-2(3H)-furanone | -3.32 | - |
培高利特 Pergolide | 0.88 | - |
14,15-脱氧喜沃林 Deoxykhivorin | 1.72 | - |
3-[(7S,8R)-5-羟基-2,2,7,8-四甲基-6-氧代-7,8-二氢吡喃[3,2-g]铬-10-基]-3-苯基丙酸 3-[(7S,8R)-5-Hydroxy-2,2,7,8-tetramethyl-6-oxo-7,8-dihydropyrano[3,2-g]chromen-10-yl]-3-phenylpropanoic acid | -2.56 | - |
脱镁叶绿甲酯酸A Pheophorbide A | 2.58 | - |
升麻素苷 prim-O-b-D-Glucosylcimifugin | - | 3.27 |
有机酸及其衍生物(3) Organic acids and their derivatives(3) | ||
1-氨基-2-羧基吡咯烷 Pyrrolidin-1-ium-2-carboxylate | 3.92 | - |
波纳丁 Bonactin | - | 1.94 |
氢离子;2-羟基丙烷-1,2,3-三羧酸盐 Hydron;2-hydroxypropane-1,2,3-tricarboxylate | -2.12 | - |
苯环型化合物(1) Benzene ring compound(1) | ||
甜菜安 Desmedipham | - | 2.18 |
核苷、核苷酸及其类似物(1) Nucleosides,nucleotides and their analogs(1) | ||
阿糖尿苷 Arabinofuranosyluracil | 2.79 | - |
表3 两种比较模式特有的DAM分类分析
Table 3 Categorization analysis of the two comparison modes-specific DAM
代谢物的名称与分类The nomenclature and classification of metabolites | 表达量倍数差异Fold difference in expression | |
---|---|---|
Q9-leafW vs. Q9-leafS | Q9-leafW vs. L6-leafW | |
SGAs生物合成相关的物质(6) Substances related to biosynthesis of SGAs(6) | ||
7-酮基胆固醇 7-Ketocholesterol | 0.19 | 1.24 |
番茄碱 Tomatidine | 8.07 | 5.98 |
茄啶 Solanidine | -0.69 | -1.47 |
β-茄碱 beta-Solanine | 3.44 | 4.44 |
α-茄碱 alpha-Solanine | -5.06 | -4.06 |
α-卡茄碱 alpha-Chaconine | -0.34 | -1.03 |
脂类物质(18) lipid(18) | ||
单硬脂酸甘油酯 Glyceryl monostearate | -1.60 | - |
2-棕榈酰甘油 2-Palmitoylglycerol | -1.29 | - |
(1R,2S,4R,5R)-5-羟基-1,7,7-三甲基双环[2.2.1]庚-2-基6-O-[(2R,3R,4R)-四氢-3,4-二羟基-4-(羟甲基)-2-呋喃基]-β-D-吡喃葡萄糖苷 (1R,2S,4R,5R)-5-Hydroxy-1,7,7-trimethylbicyclo[2.2.1]hept-2-yl6-O-[(2R,3R,4R)-tetrahydro-3,4-dihydroxy-4-(hydroxymethyl)-2-furanyl]-β-D-glucopyranoside | -2.84 | - |
4,4,8,10,14-五甲基-17-(4,5,6-三羟基-6-甲基庚烷-2-基)-2,5,6,7,9,15-六氢-1H-环戊二烯[a]菲-3,16-二酮 4,4,8,10,14-Pentamethyl-17-(4,5,6-trihydroxy-6-methylheptan-2-yl)-2,5,6,7,9,15-hexahydro-1H-cyclopenta[a]phenanthrene-3,16-dione | -2.74 | - |
芥酸酰胺 Erucamide | -2.18 | - |
叶黄素 Lutein | -1.40 | - |
贝母甲素 Peimine | - | -1.18 |
3,5,5-三甲基-4-[3-[(6-O-β-D-木吡喃糖基-β-D-吡喃葡萄糖基)氧]丁基]-2-环己烯-1-酮 3,5,5-Trimethyl-4-[3-[(6-O-β-D-xylopyranosyl-β-D-glucopyranosyl)oxy]butyl]-2-cyclohexen-1-one | - | 1.33 |
9S-羟基-10E,12Z,15Z-十八碳三烯酸 9-HOTrE | 3.43 | - |
十八碳四烯酸 FA 18︰4 | 3.17 | - |
9,12,13-三羟基十八碳-10,15-二烯酸9,12,13-Trihydroxyoctadeca-10,15-dienoic acid | 1.32 | - |
乳糖醇 Lactitol | 4.40 | - |
脂肪酸 Sebacic acid | 3.47 | - |
16-羟基棕榈酸 FA 16︰0;2O | 4.49 | - |
(S)-2-羟基-2-甲基琥珀酸 (S)-2-Hydroxy-2-methylsuccinic acid | - | 3.17 |
12,13-二羟基十八烷基-9-烯酸 12,13-Dihydroxyoctadec-9-enoic acid | - | 2.26 |
(Z)-5,8,11-三羟基十八烷基-9-烯酸 (Z)-5,8,11-Trihydroxyoctadec-9-enoic acid | - | 1.24 |
十八碳二烯四氧酸 FA 18:2;4O | - | -1.00 |
有机氧化物(11) Organic oxide(11) | ||
蔗糖 Sucrose | - | -1.69 |
苯乙基-2-O-(β-D-吡喃木糖基)-β-D-吡喃葡萄糖苷Phenethyl2-O-(β-D-xylopyranosyl)-β-D-glucopyranoside | - | -1.22 |
苯甲醇 + 己烷 Benzyl alcohol + Hex-Pen | -1.84 | - |
决奈达隆 Dronedarone | 3.86 | - |
苯甲醇 + 己烷 Benzyl alcohol + Hex-Hex | -2.00 | - |
(2S,3S,4S,5R,6R)-6-(3-苯甲酰氧基-2-羟基丙氧基)-3,4,5-三羟基氧烷-2-羧酸 (2S,3S,4S,5R,6R)-6-(3-benzoyloxy-2-hydroxypropoxy)-3,4,5-trihydroxyoxane-2-carboxylic acid | - | 3.97 |
3-O-阿魏酰奎尼酸 3-O-Feruloylquinic acid | - | 1.58 |
红景天苷 Salidroside | - | 3.16 |
山梨醇 Sorbo | - | 4.64 |
乳酮糖 Lactulose | - | -1.79 |
红霉素 Erythromycin | - | -2.18 |
苯丙类和聚酮类物质(9) Phenylpropyl and polyketone substances(9) | ||
8,8-二甲基-2-苯基-4H,8-H-苯并[1,2-b:3,4-b’]二吡喃-4-酮 8,8-Dimethyl-2-phenyl-4H,8H-benzo[1,2-b:3,4-b’]dipyran-4-one | 1.60 | - |
黄芩苷II Scutellarioside II | -1.74 | - |
山奈酚 Kaempferol | -3.64 | - |
阿魏酰-O-甲氧基酪胺 Feruloyl O-methyldopamine | 4.21 | - |
(S)-7-(2-O-6-脱氧-α-L-甘露糖基)-β-D-吡喃葡萄糖基)-2,3-二氢-5-羟基-2-(3-羟基-4-甲氧基苯基)-4H-1-苯并吡喃-4-酮 (S)-7-(2-O-6-Deoxy-α-L-mannopyranosyl)-β-D-glucopyranosyl) oxy)-2,3-dihydro-5-hydroxy-2-(3-hydroxy-4-methoxyphenyl)-4H-1-benzopyran-4-one | - | -1.15 |
3-(4-羟基-3-甲氧基苯基)-2-丙烯酸 3-(4-Hydroxy-3-methoxyphenyl)-2-propenoic acid | - | 4.45 |
芦丁 Rutin | - | 1.58 |
(+/-)-木脂酰胺 (+/-)-Grossamide | - | 3.62 |
秦皮甲素 Esculin | - | -1.12 |
有机杂环化合物(6) Organic Heterocyclic Compounds(6) | ||
(3R,4R,5R)-3-[(11E)-11,15-十六碳二烯-9-炔-1-基]-4-羟基-5-甲基二氢-2(3H)-呋喃酮 (3R,4R,5R)-3-[(11E)-11,15-Hexadecadien-9-yn-1-yl]-4-hydroxy-5-methyldihydro-2(3H)-furanone | -3.32 | - |
培高利特 Pergolide | 0.88 | - |
14,15-脱氧喜沃林 Deoxykhivorin | 1.72 | - |
3-[(7S,8R)-5-羟基-2,2,7,8-四甲基-6-氧代-7,8-二氢吡喃[3,2-g]铬-10-基]-3-苯基丙酸 3-[(7S,8R)-5-Hydroxy-2,2,7,8-tetramethyl-6-oxo-7,8-dihydropyrano[3,2-g]chromen-10-yl]-3-phenylpropanoic acid | -2.56 | - |
脱镁叶绿甲酯酸A Pheophorbide A | 2.58 | - |
升麻素苷 prim-O-b-D-Glucosylcimifugin | - | 3.27 |
有机酸及其衍生物(3) Organic acids and their derivatives(3) | ||
1-氨基-2-羧基吡咯烷 Pyrrolidin-1-ium-2-carboxylate | 3.92 | - |
波纳丁 Bonactin | - | 1.94 |
氢离子;2-羟基丙烷-1,2,3-三羧酸盐 Hydron;2-hydroxypropane-1,2,3-tricarboxylate | -2.12 | - |
苯环型化合物(1) Benzene ring compound(1) | ||
甜菜安 Desmedipham | - | 2.18 |
核苷、核苷酸及其类似物(1) Nucleosides,nucleotides and their analogs(1) | ||
阿糖尿苷 Arabinofuranosyluracil | 2.79 | - |
图4 马铃薯叶片在S2时期的简要SGA生物合成路径示意图 黑色和红色数字分别表示Q9-leafW vs. Q9-leafS和Q9-leafW vs. L6-leafW中的DEP和DAM,DEP和DAM的差异通过蛋白质和代谢物表达量差异倍数的log2值体现,各DEP和DAM在组学数据分析中的编号对应标识在其上下方。虚线箭头表示未注释到差异因此省略了的反应步骤。PVS1:倍半萜合酶;PSS1:鲨烯合酶;SSR2:甾醇侧链还原酶2;C5-SD:△7-甾醇-C5(6)去饱和酶;UGTs:尿苷二磷酸依赖性糖基转移酶;DPS:马铃薯茄碱合成双加氧酶
Fig. 4 Proposed brief potato leaf SGAs biosynthetic pathway at the S2 stage Black numbers represent DEP and DAM in Q9-leafW vs. Q9-leafS,while red numbers represent DEPs and DAMs in Q9-leafW vs. L6-leafW. Differences of DEP are reflected by the log2-normalized protein expression levels,which was same in DAM. IDs of each DEP and DAM generated from the omics data were displayed above or below. Dotted arrows indicates the omitted reaction steps because there were no differences annotated. PVS1:Sesquiterpene synthase;PSS1:Squalene synthase;SSR2:Sterol side chain reductase;C5-SD:△7-sterol C5(6)-desaturase;UGTs:Uridine diphosphate-dependent glycosyltransferases;DPS:Dioxygenase for potato solanidane synthesis
图5 两种比较模式下的组学联合分析 A、B:富集DEP和DAM最多的Top 10 KEGG通路;C、D:PPI(protein-protein interactions)网络图;E、F:DEP-DAM相关性网络图。C和D中的圆圈表示DEP(蓝色和红色分别代表下调和上调表达的蛋白质),线条表示蛋白质间存在相互作用,圆圈越大表示蛋白质互作连接的数量越多。E和F图中的红色圆圈代表DAM、绿色方框代表DEP,线条代表相关系数,其中蓝色和红色分别代表负相关和正相关,线条的粗细反映了相关性的强弱,圆圈/方框越大表示DAM和DEP互作连接的数量越多。相关性分析均基于皮尔森相关系数检验
Fig. 5 Joint omics analysis under the two comparison modes A,B:Top 10 KEGG pathways enriched with the most DEP and DAM;C,D:PPI network map;E,F:DEP-DAM correlation network diagram. Circles in the PPI network map indicate DEP(blue and red represent down- and up-regulated proteins,respectively),lines indicate the presence of protein interactions,the larger the circles,the more protein interacted with each other. In the correlation network map,red circles represent DAM and green boxes represent DEP,and lines among them represents the correlation coefficient. Blue and red lines represent the negative and positive correlations,respectively. The thickness of lines reflects the correlation degrees,and the larger the circle/box,the greater the numbers of DAM and DEP interacted. Correlation analysis was based on the Person correlation coefficient test
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