Acta Horticulturae Sinica ›› 2025, Vol. 52 ›› Issue (1): 123-135.doi: 10.16420/j.issn.0513-353x.2023-0801
• Genetic & Breeding·Germplasm Resources·Molecular Biology • Previous Articles Next Articles
ZHANG Zixin, CHEN Shuting, ZHOU Weixin, ZHANG Yihan, LU Qian, LI Zhongyi, WU Xinyang, XU Pei**()
Received:
2024-08-21
Revised:
2024-10-18
Online:
2025-01-25
Published:
2025-01-19
Contact:
XU Pei
ZHANG Zixin, CHEN Shuting, ZHOU Weixin, ZHANG Yihan, LU Qian, LI Zhongyi, WU Xinyang, XU Pei. Identification of Cowpea Mild Mottle Virus Variants in Zhejiang and Localization of TGB Proteins[J]. Acta Horticulturae Sinica, 2025, 52(1): 123-135.
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URL: https://www.ahs.ac.cn/EN/10.16420/j.issn.0513-353x.2023-0801
用途 Usage | 引物 Primer | 引物序列(5′-3′) Primers sequence |
---|---|---|
5′端快速cDNA扩增 5′RACE | 5AP | GGTCTCAAGGGCTCTAAACATTT |
GSP1 | CAACTCATGACCAGCTCAGC | |
GSP2 | TTCCCTTGGCAGAACGAGAC | |
序列扩增 Sequence amplification | CPMMV-F1 | GTTTACCCACCGGAGTTGCT |
CPMMV-R2 | AATCACTTTGGCAGGGATCC | |
CPMMV-F2 | TCAAAGCTAGAATGTCTAGG | |
序列扩增;病毒检测 Sequence amplification;Virus detection | CPMMV-R2 | CTGTCAATACAGTTTTGGAG |
CPMMV-F3 | AGATGAAGGAATTAGAGAGG | |
序列扩增 Sequence amplification | CPMMV-R3 | AGAACCTCAGCTACGTGCTC |
3′端快速cDNA扩增 3′RACE | 3AP | GTTTTCCCAGTCACGACAC |
GSP3 | GCCCTTCCAGACATTGATGC | |
GSP4 | TCAAATAACATGGCCACAGCTG | |
亚细胞定位载体构建 Subcellular localization vector construction | TGB1-F | ATGAATGAACTGATCAGTAA |
TGB1-R | CTCAGAGTTTGGATAGGTTG | |
TGB2-F | ATGCCACTGACTCCACCA | |
TGB2-R | GTGAACCCTATTGCAGA | |
TGB3-F | ATGTCTGCAATAGGGTTCAC | |
TGB3-R | CAACCTACAACTTAGGCTA | |
病毒检测 Virus detection | MDV-F | ACTCAAGGAGAGGCAAGAGC |
MDV-R | ATGTCGGCTGTCTTTCCACC | |
CMV-F | AAGTGGTTTGCAGCGTTGAC | |
CMV-R | TGTTGCAAATCACGCACTCG |
Table 1 Primers sequences used in this study
用途 Usage | 引物 Primer | 引物序列(5′-3′) Primers sequence |
---|---|---|
5′端快速cDNA扩增 5′RACE | 5AP | GGTCTCAAGGGCTCTAAACATTT |
GSP1 | CAACTCATGACCAGCTCAGC | |
GSP2 | TTCCCTTGGCAGAACGAGAC | |
序列扩增 Sequence amplification | CPMMV-F1 | GTTTACCCACCGGAGTTGCT |
CPMMV-R2 | AATCACTTTGGCAGGGATCC | |
CPMMV-F2 | TCAAAGCTAGAATGTCTAGG | |
序列扩增;病毒检测 Sequence amplification;Virus detection | CPMMV-R2 | CTGTCAATACAGTTTTGGAG |
CPMMV-F3 | AGATGAAGGAATTAGAGAGG | |
序列扩增 Sequence amplification | CPMMV-R3 | AGAACCTCAGCTACGTGCTC |
3′端快速cDNA扩增 3′RACE | 3AP | GTTTTCCCAGTCACGACAC |
GSP3 | GCCCTTCCAGACATTGATGC | |
GSP4 | TCAAATAACATGGCCACAGCTG | |
亚细胞定位载体构建 Subcellular localization vector construction | TGB1-F | ATGAATGAACTGATCAGTAA |
TGB1-R | CTCAGAGTTTGGATAGGTTG | |
TGB2-F | ATGCCACTGACTCCACCA | |
TGB2-R | GTGAACCCTATTGCAGA | |
TGB3-F | ATGTCTGCAATAGGGTTCAC | |
TGB3-R | CAACCTACAACTTAGGCTA | |
病毒检测 Virus detection | MDV-F | ACTCAAGGAGAGGCAAGAGC |
MDV-R | ATGTCGGCTGTCTTTCCACC | |
CMV-F | AAGTGGTTTGCAGCGTTGAC | |
CMV-R | TGTTGCAAATCACGCACTCG |
Fig. 2 RT-PCR detection of CPMMV,CMV and MDV from samples randomly selected in field of common bean M:DL2 000 DNA marker;1-10:Ten randomly selected common bean leaf samples from virus-infected field plants
Fig. 4 RT-PCR detection of CPMMV in common bean leaves mechanically inoculated with CPMMV-ZJ M:DL2 000 DNA marker;1-10:Common bean leaf samples inoculated with CPMMV;11:Positive control;12:Negative control
Fig. 8 Subcellular localization analysis of TGBs of CPMMV Zhejiang(CPMMV-ZJ)and Jiangsu(CPMMV-JS)isolate(A)and the clustering of chloroplasts around the nuclei caused by TGB2-ZJ(B) White arrows represents perinuclear aggregation of chloroplasts
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