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园艺学报 ›› 2025, Vol. 52 ›› Issue (9): 2395-2409.doi: 10.16420/j.issn.0513-353x.2024-0814

• 遗传育种·种质资源·分子生物学 • 上一篇    下一篇

宁夏枸杞LbWaxy基因家族鉴定及高浓度CO2处理下的基因表达特征分析

张婷1, 王博涛2, 张磊2, 宋丽华1, 曹兵1,3, 马亚平1,*()   

  1. 1 宁夏大学林业与草业学院, 银川 750021
    2 宁夏大学葡萄酒与园艺学院, 银川 750021
    3 宁夏葡萄酒与防沙治沙职业技术学院, 银川 750021
  • 收稿日期:2025-05-09 修回日期:2025-06-27 出版日期:2025-09-25 发布日期:2025-09-24
  • 通讯作者:
  • 基金资助:
    宁夏自然科学基金项目(2024AAC05038); 国家自然科学基金项目(32160393)

Identification of the LbWaxy Gene Family in Lycium barbarum and Analysis of Gene Expression Characteristics Under High Concentrations of CO2

ZHANG Ting1, WANG Botao2, ZHANG Lei2, SONG Lihua1, CAO Bing1,3, MA Yaping1,*()   

  1. 1 School of Forestry and Grassland ScienceNingxia University, Yinchuan 750021, China
    2 College of Enology and HorticultureNingxia University, Yinchuan 750021, China
    3 Ningxia Technical College of Wine and Desertification Prevention, Yinchuan 750021, China
  • Received:2025-05-09 Revised:2025-06-27 Published:2025-09-25 Online:2025-09-24

摘要:

Waxy是调控直链淀粉合成的关键基因,通过生物信息方法,鉴定了宁夏枸杞中7个LbWaxy基因家族成员,系统分析了其在CO2浓度倍增处理下不同发育期器官组织中的表达特征。理化性质分析表明,LbWaxy基因家族主要分布于4条染色体上,且均含有Glycos_transf保守结构域;编码氨基酸数为613 ~ 1 408,蛋白分子量为67.19 ~ 158.23 kD,等电点介于5.06 ~ 8.29之间,均为亲水性蛋白,亚细胞定位预测主要位于细胞质中。进化树分析表明,LbWaxy与茄科植物及拟南芥的Waxy基因进化关系保守,主要聚类为3个大组和6个亚组。共线性分析发现LbWaxy基因与番茄、辣椒、茄子及拟南芥之间存在共线性基因对。蛋白互作网络分析表明LbWaxy2分别与LbWaxy1、LbWaxy4、LbWaxy5、LbWaxy7间存在互作关系。基于转录组和RT-qPCR分析表明,CO2浓度倍增处理下,LbWaxy家族成员在不同发育时期的器官组织中差异表达,其中,7个成员在青果期的茎和转色期的叶中均显著上调;LbWaxy1、bWaxy2LbWaxy7在不同发育时期茎、根及果中显著上调,表明其为响应CO2浓度倍增参与宁夏枸杞淀粉合成的关键调控基因。

关键词: 宁夏枸杞, LbWaxy家族基因, 淀粉酶, 表达分析, 大气CO2浓度

Abstract:

The Waxy gene,a key regulator of amylose synthesis,is central to starch biosynthesis. In this study,bioinformatic analysis identified seven LbWaxy genes in Goji berr(Lycium barbarum L.). Systematically characterized their expression patterns across multiple tissues at different stages under elevated CO2 concentrations. Genomic mapping showed that the LbWaxy genes are distributed across four chromosomes,and all encode proteins containing a Glycos_transf conserved domain. The encoded proteins range from 613 to 1 408 aa,with predicted molecular weights of 67.19 to 158.23 kDa and isoelectric points ranging from 5.06 to 8.29. Subcellular localization prediction indicated that all proteins are hydrophilic and primarily cytoplasmic. Phylogenetic analysis demonstrated a conserved evolutionary relationship between LbWaxy and Waxy genes from Solanaceae species and Arabidopsis thaliana,with the proteins clustering into three main groups and six subgroups. Collinearity analysis indicated syntenic relationships between the LbWaxy genes and homologs in tomato(Solanum lycopersicum),pepper(Capsicum annuum),eggplant(Solanum melongena),and Arabidopsis thaliana. Protein-protein interaction network predictions suggested potential interactions between LbWaxy2 and LbWaxy1,LbWaxy4,LbWaxy5,and LbWaxy7. Combined transcriptomic and RT-qPCR analyses revealed differential expression of LbWaxy genes under elevated CO2 concentrations across tissues and stages. Notably,all seven members showed significant up-regulated in stems at the green fruit stage and in leaves at the different stage. Furthermore,LbWaxy1LbWaxy2,and LbWaxy7 exhibited significant up-regulated in stems,roots,and fruits at multiple stages,suggesting their role as key regulatory genes in starch synthesis under elevated CO2 concentrations.

Key words: Lycium barbarum, LbWaxy family genes, amylase, expression analysis, atmospheric CO2 concentration