Research Progress of Plant Molecular Phylogenetic Analyses Based on DNA Sequence Data—A Case Review in Rosaceae

ACTA HORTICULTURAE SINICA ›› 2009, Vol. 36 ›› Issue (12): 1827-1836.

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Research Progress of Plant Molecular Phylogenetic Analyses Based on DNA Sequence Data—A Case Review in Rosaceae

ZHENG Xiao-yan;CAO J ia-Shu;TENG Yuan-wen^*

(Department of Horticulture, the State Agricultural Ministry Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Zhejiang University, Hangzhou 310029, China)

Received:2009-06-01 Revised:2009-11-19 Online:2009-12-25 Published:2009-12-25
Contact: TENG Yuan-wen

Abstract

Abstract: During the last twenty years, DNA sequences have been widely used in phylogenetic analyses of plants at the different taxonomic levels, and provided convincing evidence to solve the long-standing disputed or unsolved phylogenetic problems. In this paper, the current status of applications of DNA fragments in plant phylogenetic studies were briefly reviewed taking Rosaceae as an examp le, and the common troubles occurring in phylogenetic studies and the possible reasons were discussed in detail. Finally, the strategies and
points for attention in selecting DNA sequences were proposed for phylogenetic reconstruction of plant taxa especially for plants that have undergone complex evolutionary processes such as hybridization, polyploidization and rapid radiation.

Key words: Rosaceae, DNA sequence, phylogeny, ITS pseudogene, Low2copy nuclear gene

CLC Number:

S 685.12

ZHENG Xiao-yan;CAO J ia-Shu;TENG Yuan-wen. Research Progress of Plant Molecular Phylogenetic Analyses Based on DNA Sequence Data—A Case Review in Rosaceae[J]. ACTA HORTICULTURAE SINICA, 2009, 36(12): 1827-1836.

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Research Progress of Plant Molecular Phylogenetic Analyses Based on DNA Sequence Data—A Case Review in Rosaceae

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