Research Progress on Molecular Basis of Plant Architecture Related Traits in Cucumber

doi:10.16420/j.issn.0513-353x.2021-0674

Acta Horticulturae Sinica ›› 2022, Vol. 49 ›› Issue (12): 2683-2702.doi: 10.16420/j.issn.0513-353x.2021-0674

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Research Progress on Molecular Basis of Plant Architecture Related Traits in Cucumber

SONG Mengfei, ZHA Gaohui, CHEN Jinfeng, LOU Qunfeng()

State Key Laboratory of Crop Genetics and Germplasm Enhancement，College of Horticulture，Nanjing Agricultural University，Nanjing 210095，China

Received:2022-03-22 Revised:2022-05-12 Online:2022-12-25 Published:2023-01-02
Contact: LOU Qunfeng E-mail:qflou@njau.edu.cn
Supported by:
江苏省农业科技自主创新基金项目(CX(20)2019)

Abstract

Abstract:

This review focused on the recent research findings related to cucumber plant architecture involving genetic pattern，QTL mapping and gene cloning. The molecular were summarized basic research progress in seven aspects：plant height，determinate / indeterminate growth pattern，hypocotyl length，leaf shape，leaf size，lateral branch development ability，and tendril development. The existing related research gaps and shortcomings were analyzed，and a way forward for the development of the ideal plant architecture of cucumber was proposed. The key research directions highlighted in this review will provide a reference for the breeding of the ideal plant architecture of cucumber.

Key words: cucumber, plant architecture, genetic pattern, QTL mapping, gene cloning

CLC Number:

S642.2

SONG Mengfei, ZHA Gaohui, CHEN Jinfeng, LOU Qunfeng. Research Progress on Molecular Basis of Plant Architecture Related Traits in Cucumber[J]. Acta Horticulturae Sinica, 2022, 49(12): 2683-2702.

Figures/Tables 9

References 82

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性状分类 Classification	性状/突变体 Phenotype /mutant	基因名称 Gene name	基因编号 Gene ID	参考文献 Reference
株高 Plant height	矮化Dawrf/cp	cp	CsaV3_4G036030	Li et al.，2011
	矮化Dawrf/Csdw	CsCLAVATA1	CsaV3_3G045960	Xu et al.，2018
	矮化Dawrf/td-1	CsGN5	CsaV3_6G052930	Chen et al.，2017
	矮化Dawrf	CsYAB5	CsaV3_2G002960	Yan et al.，2020
	短节间Short internote/si	CsVFB1	CsaV3_4G034690	Lin et al.，2016
	紧凑株型Compact/cp-3	Cullin	CsaV3_6G017300	van der Linden，2018
	紧凑株型Compact/cpa	CsDWF5	CsaV3_7G033720	Zhang et al.，2021b
	超级紧凑株型Super compact/scp-1	CsCYP85A	CsaV3_5G038650	Wang et al.，2017
	超级紧凑株型Super compact/scp-2	CsDET2	CsaV3_3G034190	Hou et al.，2017
	短节间距Short internote	CsIVP	CsaV3_6G041730	Yan et al.，2020
有限生长 Determinate growth	有限生长Determinate growth/de	CsTFL1	CsaV3_6G040640	Wen et al.，2019
		CsTLF1d /CsCEN	CsaV3_6G014990	Njogu et al.，2020;Wen et al.，2021
		CsLFY	CsaV3_1G000050	Zhao et al.，2018
		CsCML25	CsaV3_5G028160	王雪艳等，2020
下胚轴长度 Hypocotyl length	短下胚轴Short hypocotyl/sh1	sh1	CsaV3_3G012370	Bo et al.，2016
	短下胚轴Short hypocotyl/sh5.1	sh5.1	CsaV3_5G005500	Zhang et al.，2021a
	长下胚轴Long hypocotyl/lh	CsLH	CsaV3_3G015190	Liu et al.，2021
叶形 Leaf shape	裂叶Lobed leaves	CsHAN1	CsaV3_4G005580	Ding et al.，2015
	小心形叶 Small and cordate leaf/scl1	scl1	CsaV3_7G006420	Gao et al.，2017
	窄叶Narrower leaf/mango fruit	CsWOX1	CsaV3_1G007120	Niu et al.，2018
	卷叶Curly leaf/cul-1，cul-2	CsPHB	CsaV3_6G052310	Rong et al.，2019
	圆叶Round leaf/rl	rl	CsaV3_1G036980	Song et al.，2019
叶大小 Leaf size	小叶Little leaf/ll	ll	CsaV3_6G009540	Yang et al.，2018
	小心形叶 Small and cordate leaf/scl1	scl1	CsaV3_7G006420	Gao et al.，2017
	真叶变形 Rosette leaf	CsBRC1-like	CsaV3_1G006490	Shen et al.，2021
侧枝发育 Lateral branch	侧枝抑制 Lateral suppressor	CLS	CsaV3_3G003590	Yuan et al.，2010
侧枝发育 Lateral branch	多分枝 Multiple branches	CsBRC1	CsaV3_1G003610	Shen et al.，2019
卷须发育 Tendril	卷须退化Modified tendrils/ten	TEN	CsaV3_5G039160	Wang et al.，2015
卷须发育 Tendril	卷须异常Tendril-less/td-1	CsGN5	CsaV3_6G052930	Chen et al.，2017

性状分类 Classification	性状/突变体 Phenotype /mutant	基因名称 Gene name	基因编号 Gene ID	参考文献 Reference
株高 Plant height	矮化Dawrf/cp	cp	CsaV3_4G036030	Li et al.，2011
	矮化Dawrf/Csdw	CsCLAVATA1	CsaV3_3G045960	Xu et al.，2018
	矮化Dawrf/td-1	CsGN5	CsaV3_6G052930	Chen et al.，2017
	矮化Dawrf	CsYAB5	CsaV3_2G002960	Yan et al.，2020
	短节间Short internote/si	CsVFB1	CsaV3_4G034690	Lin et al.，2016
	紧凑株型Compact/cp-3	Cullin	CsaV3_6G017300	van der Linden，2018
	紧凑株型Compact/cpa	CsDWF5	CsaV3_7G033720	Zhang et al.，2021b
	超级紧凑株型Super compact/scp-1	CsCYP85A	CsaV3_5G038650	Wang et al.，2017
	超级紧凑株型Super compact/scp-2	CsDET2	CsaV3_3G034190	Hou et al.，2017
	短节间距Short internote	CsIVP	CsaV3_6G041730	Yan et al.，2020
有限生长 Determinate growth	有限生长Determinate growth/de	CsTFL1	CsaV3_6G040640	Wen et al.，2019
		CsTLF1d /CsCEN	CsaV3_6G014990	Njogu et al.，2020;Wen et al.，2021
		CsLFY	CsaV3_1G000050	Zhao et al.，2018
		CsCML25	CsaV3_5G028160	王雪艳等，2020
下胚轴长度 Hypocotyl length	短下胚轴Short hypocotyl/sh1	sh1	CsaV3_3G012370	Bo et al.，2016
	短下胚轴Short hypocotyl/sh5.1	sh5.1	CsaV3_5G005500	Zhang et al.，2021a
	长下胚轴Long hypocotyl/lh	CsLH	CsaV3_3G015190	Liu et al.，2021
叶形 Leaf shape	裂叶Lobed leaves	CsHAN1	CsaV3_4G005580	Ding et al.，2015
	小心形叶 Small and cordate leaf/scl1	scl1	CsaV3_7G006420	Gao et al.，2017
	窄叶Narrower leaf/mango fruit	CsWOX1	CsaV3_1G007120	Niu et al.，2018
	卷叶Curly leaf/cul-1，cul-2	CsPHB	CsaV3_6G052310	Rong et al.，2019
	圆叶Round leaf/rl	rl	CsaV3_1G036980	Song et al.，2019
叶大小 Leaf size	小叶Little leaf/ll	ll	CsaV3_6G009540	Yang et al.，2018
	小心形叶 Small and cordate leaf/scl1	scl1	CsaV3_7G006420	Gao et al.，2017
	真叶变形 Rosette leaf	CsBRC1-like	CsaV3_1G006490	Shen et al.，2021
侧枝发育 Lateral branch	侧枝抑制 Lateral suppressor	CLS	CsaV3_3G003590	Yuan et al.，2010
侧枝发育 Lateral branch	多分枝 Multiple branches	CsBRC1	CsaV3_1G003610	Shen et al.，2019
卷须发育 Tendril	卷须退化Modified tendrils/ten	TEN	CsaV3_5G039160	Wang et al.，2015
卷须发育 Tendril	卷须异常Tendril-less/td-1	CsGN5	CsaV3_6G052930	Chen et al.，2017

性状 Trait	参考文献 Reference	QTL	贡献率/% Contribution	连锁群号 Linkage group No.	染色体号 Chromosome No.
主茎长度 Main stem length	Serquen et al.，1997	F-de	44.5	B
		OP-R13-OP-H5	6.5	C
		ll-BC-592	12.1	D
		U15-2-OP-I20	8.0	E
		OP-AB14-BC-469	9.5	G
株高 Plant height	辛明等，2008	Qchl1	23.0	1
	辛明等，2008	Qchl2	8.4	1
	嵇怡等，2009	QPH4_1	13.2	4
	嵇怡等，2009	QPH4_2	13.0	4
	苗晗等，2012a	Msl1.1	17.2 ~ 32.1		1
		Msl6.1	8.6		6
		Msl6.2	9.6		6
节间距 Length of the main stem internode	苗晗等，2012a	Lmi1.1	11.5 ~ 25.0		1
		Lmi2.1	8.5		2
		Lmi5.1	10.0		5
		Lmi5.2	8.1		5
		Lmi6.1	11.5		6
		Lmi6.2	7.5		6
	嵇怡等，2009	QPN4_1	13.1	4
节数 Node number of main stem	苗晗等，2012a	Nms1.1	32.7		1
下胚轴长 Hypocotyl length	张冠英等，2011	Hyl1.1	12.2	1
		Hyl2.1	9.4	2
		Hyl2.2	7.4	2
		Hyl2.3	5.5	2
		Hyl2.4	5.9	2
		Hyl4.1	8.9	4
		Hyl4.2	6.9	4
		Hyl6.1	19.8	6
		Hyl6.2	10.4	6
		Hyl7.1	6.4	7
	苗晗等，2012b	Hl5.1	15.2		5
		Hl5.2	13.4		5
		Hl5.3	11.4 ~ 21.0		5
		Hl6.1	22.6 ~ 24.2		6
		Hl6.2	17.6 ~ 22.5		6
	Wang et al.，2016	Hl1.1	10.3		4
		Hl2.1	7.6 ~ 11.3		2
		Hl2.2	8.7		2
		Hl3.1	10.0		3
		Hl3.2	13.7		3
		Hl3.3	15.1		3
		Hl3.4	12.7		3
		Hl5.1	14.8		5
性状 Trait	参考文献 Reference	QTL	贡献率/% Contribution	连锁群号 Linkage group No.	染色体号 Chromosome No.
		Hl5.2	10.8		5
		Hl6.1	11.4		6
	蔡和序等，2020	Hl1.1	\		1
		Hl1.2	\		1
		Hl2.1	\		2
		Hl3.1	\		3
		Hl3.2	\		3
		Hl4.1	\		4
		Hl5.1	\		5
		Hl6.1	\		6
叶面积 Leaf area	Fazio et al.，2003b	ll	\		1
	吴鹏等，2009	Qchl1	8.7	1
	Weng et al.，2010	ll	\		6
	史婷婷等，2014	ll2	21.2		7
	张海英等，2004	la-1	10.6	1
		la-2	11.9	1
		la-3	7.3	1
		la-4	8.3	7
		la-5	20.2	9
叶大小 Leaf size	Qi et al.，2013	ls1.1	\		1
		ls2.1	\		2
		ls2.2	\		2
	李效尊，2007	lhl1.1	8.2	1
		lhl1.2	9.6	1
		lhl1.3	19.5	1
		lhl1.4	5.1 ~ 7.0	1
		lhl2.1	14.1	2
		lhl2.2	8.1	2
		lhl2.3	32.9	2
		lhl6.1	4.7 ~ 9.5	6
侧枝长度 Lateral branch length	Wang et al.，2005	lbl1	10.4	2
		lbl1	6.2	2
		lbl1	7.7	1
		lbl1	6.9	7
侧枝数 Lateral branch number	Serquen et al.，1997	F	13.1	B
		de-OP-L18-2	39.6	B
		BC-403-OP-W7-2	13.6	D
		OP-AJ6-BC-523	11.0	D
	Fazio et al.，2003a	mlb1.1	9.1 ~ 10.6	1
		mlb1.2	2.3	1
		mlb1.3	1.8	1
		mlb1.4	8.1 ~ 32.4	1
		mlb3.1	3.5	3
		mlb4.1	5.4	4
		mlb4.2	4.2	4
		mlb4.3	2.8	4
		mlb4.4	1.7 ~ 4.6	4
		mlb5.1	7.2	5
		mlb6.1	1.5 ~ 2.9	6
		mlb6.2	3.7 ~ 4.3	6
		mlb7.1	2.8	7
	Wang et al.，2005	lbn1	10.6	2
		lbn2	7.6	2
		lbn3	6.5	1
		lbn4	10.0	7

性状 Trait	参考文献 Reference	QTL	贡献率/% Contribution	连锁群号 Linkage group No.	染色体号 Chromosome No.
主茎长度 Main stem length	Serquen et al.，1997	F-de	44.5	B
		OP-R13-OP-H5	6.5	C
		ll-BC-592	12.1	D
		U15-2-OP-I20	8.0	E
		OP-AB14-BC-469	9.5	G
株高 Plant height	辛明等，2008	Qchl1	23.0	1
	辛明等，2008	Qchl2	8.4	1
	嵇怡等，2009	QPH4_1	13.2	4
	嵇怡等，2009	QPH4_2	13.0	4
	苗晗等，2012a	Msl1.1	17.2 ~ 32.1		1
		Msl6.1	8.6		6
		Msl6.2	9.6		6
节间距 Length of the main stem internode	苗晗等，2012a	Lmi1.1	11.5 ~ 25.0		1
		Lmi2.1	8.5		2
		Lmi5.1	10.0		5
		Lmi5.2	8.1		5
		Lmi6.1	11.5		6
		Lmi6.2	7.5		6
	嵇怡等，2009	QPN4_1	13.1	4
节数 Node number of main stem	苗晗等，2012a	Nms1.1	32.7		1
下胚轴长 Hypocotyl length	张冠英等，2011	Hyl1.1	12.2	1
		Hyl2.1	9.4	2
		Hyl2.2	7.4	2
		Hyl2.3	5.5	2
		Hyl2.4	5.9	2
		Hyl4.1	8.9	4
		Hyl4.2	6.9	4
		Hyl6.1	19.8	6
		Hyl6.2	10.4	6
		Hyl7.1	6.4	7
	苗晗等，2012b	Hl5.1	15.2		5
		Hl5.2	13.4		5
		Hl5.3	11.4 ~ 21.0		5
		Hl6.1	22.6 ~ 24.2		6
		Hl6.2	17.6 ~ 22.5		6
	Wang et al.，2016	Hl1.1	10.3		4
		Hl2.1	7.6 ~ 11.3		2
		Hl2.2	8.7		2
		Hl3.1	10.0		3
		Hl3.2	13.7		3
		Hl3.3	15.1		3
		Hl3.4	12.7		3
		Hl5.1	14.8		5
性状 Trait	参考文献 Reference	QTL	贡献率/% Contribution	连锁群号 Linkage group No.	染色体号 Chromosome No.
		Hl5.2	10.8		5
		Hl6.1	11.4		6
	蔡和序等，2020	Hl1.1	\		1
		Hl1.2	\		1
		Hl2.1	\		2
		Hl3.1	\		3
		Hl3.2	\		3
		Hl4.1	\		4
		Hl5.1	\		5
		Hl6.1	\		6
叶面积 Leaf area	Fazio et al.，2003b	ll	\		1
	吴鹏等，2009	Qchl1	8.7	1
	Weng et al.，2010	ll	\		6
	史婷婷等，2014	ll2	21.2		7
	张海英等，2004	la-1	10.6	1
		la-2	11.9	1
		la-3	7.3	1
		la-4	8.3	7
		la-5	20.2	9
叶大小 Leaf size	Qi et al.，2013	ls1.1	\		1
		ls2.1	\		2
		ls2.2	\		2
	李效尊，2007	lhl1.1	8.2	1
		lhl1.2	9.6	1
		lhl1.3	19.5	1
		lhl1.4	5.1 ~ 7.0	1
		lhl2.1	14.1	2
		lhl2.2	8.1	2
		lhl2.3	32.9	2
		lhl6.1	4.7 ~ 9.5	6
侧枝长度 Lateral branch length	Wang et al.，2005	lbl1	10.4	2
		lbl1	6.2	2
		lbl1	7.7	1
		lbl1	6.9	7
侧枝数 Lateral branch number	Serquen et al.，1997	F	13.1	B
		de-OP-L18-2	39.6	B
		BC-403-OP-W7-2	13.6	D
		OP-AJ6-BC-523	11.0	D
	Fazio et al.，2003a	mlb1.1	9.1 ~ 10.6	1
		mlb1.2	2.3	1
		mlb1.3	1.8	1
		mlb1.4	8.1 ~ 32.4	1
		mlb3.1	3.5	3
		mlb4.1	5.4	4
		mlb4.2	4.2	4
		mlb4.3	2.8	4
		mlb4.4	1.7 ~ 4.6	4
		mlb5.1	7.2	5
		mlb6.1	1.5 ~ 2.9	6
		mlb6.2	3.7 ~ 4.3	6
		mlb7.1	2.8	7
	Wang et al.，2005	lbn1	10.6	2
		lbn2	7.6	2
		lbn3	6.5	1
		lbn4	10.0	7

Research Progress on Molecular Basis of Plant Architecture Related Traits in Cucumber

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