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ACTA HORTICULTURAE SINICA ›› 2016, Vol. 43 ›› Issue (6): 1099-1106.doi: 10.16420/j.issn.0513-353x.2016-0323

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Function Analysis of Carrot SOC1 Homologues Responding to Photoperiod

LIU Li-jie,OU Cheng-gang,ZHAO Zhi-wei,SUN Ting-ting,and ZHUANG Fei-yun*   

  1. (Institute of Vegetables and Flowers,Chinese Academy of Agricultural Sciences,Key Laboratory of Biology and Genetic Improvement of Horticultural Crops,Beijing 100081,China)
  • Online:2016-06-25 Published:2016-06-25

Abstract:

Basis on the RNA-seq analysisthe relative expression and function of carrot SUPPRESSOR OF OVEREXPRESSION OF CONSTANTS 1SOC1homologues under photoperiod treatment were investigated with wild sensitive speciesSongziand cultivarAmsterdamwhich was tolerant to premature bolting. There were two carrot SOC1 homologuesDcSOC1-1 and DcSOC1-2which were annotated with complete open reading framesORFencoding 217 and 211 amino acids respectivelywhich both containing MADS-box and K-box domain and a conserved SOC1 motif at the carboxy terminus. Phylogenetic analysis showed that DcSOC1-1 and DcSOC1-2 were closely related with kiwifruit AcSOC1f and grape VvSOC1belonging to SOC1/TM3 subfamily. The expression of DcSOC1-1 in the leaves ofSongziwas significantly higher than that inAmsterdamunder short day and long day treatmentsand long day can promote its expressionbut the expression of DcSOC1-2 inSongziandAmsterdamwas low. During the growth of spring and autumnthe maximum expression values of DcSOC1-1 inSongzileaves were 522.4 and 401.7 respectivelybut its expression was very low in levels ofAmsterdam. The correlation analysis revealed that the expression of DcSOC1-1 was significantly correlated with the ratio of premature boltingwhich indicated DcSOC1-1 played an important role in carrot premature bolting.

Key words: carrot, premature bolting, photoperiod, DcSOC1, qPCR

CLC Number: