Acta Horticulturae Sinica ›› 2024, Vol. 51 ›› Issue (5): 939-955.doi: 10.16420/j.issn.0513-353x.2023-0441
• Genetic & Breeding·Germplasm Resources·Molecular Biology • Previous Articles Next Articles
DENG Shufang1, LIU Qian1, LIU Ling1, CHEN Ou1, WANG Wenjun1,2, ZENG Kaifang1,2, DENG Lili1,2,*()
Received:
2024-01-26
Revised:
2024-03-11
Online:
2024-05-25
Published:
2024-05-29
DENG Shufang, LIU Qian, LIU Ling, CHEN Ou, WANG Wenjun, ZENG Kaifang, DENG Lili. Cloning of Mandarin Fruit CcHY5 and Its Function in Fruit Coloration[J]. Acta Horticulturae Sinica, 2024, 51(5): 939-955.
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URL: https://www.ahs.ac.cn/EN/10.16420/j.issn.0513-353x.2023-0441
基因名称 Gene name | 上游引物(5′-3′) Forward primer | 下游引物(5′-3′) Reverse primer |
---|---|---|
Actin | TGGATTCTGGTGATGGTGTG | TGGATTCTGGTGATGGTGTG |
CcHY5 | AAGGCGTACTTGAATGAGTT | AGGTAACTTTCAACCAGCAA |
CcNYC | GGCACGGTTTTCCTTTACAGATG | TGTTGTAGTTCTGACGCTTTCTG |
CcRCCR | CAAACGTTGCAGGTCTTCGG | CAAACGTTGCAGGTCTTCGG |
CcCHL1 | CCCGTCTCCGTTGAAGCTAA | GCAGTGCCGTGGAAAAACAA |
CcCHL2 | CGTTCTCGCGCGGAAAATAA | TTTGGAGGAGGTGGTGAGGA |
CcCHL3 | CCTTGTGCTCCGAAAGGAGT | CCTTGTGCTCCGAAAGGAGT |
Table 1 Primers used in qRT-PCR
基因名称 Gene name | 上游引物(5′-3′) Forward primer | 下游引物(5′-3′) Reverse primer |
---|---|---|
Actin | TGGATTCTGGTGATGGTGTG | TGGATTCTGGTGATGGTGTG |
CcHY5 | AAGGCGTACTTGAATGAGTT | AGGTAACTTTCAACCAGCAA |
CcNYC | GGCACGGTTTTCCTTTACAGATG | TGTTGTAGTTCTGACGCTTTCTG |
CcRCCR | CAAACGTTGCAGGTCTTCGG | CAAACGTTGCAGGTCTTCGG |
CcCHL1 | CCCGTCTCCGTTGAAGCTAA | GCAGTGCCGTGGAAAAACAA |
CcCHL2 | CGTTCTCGCGCGGAAAATAA | TTTGGAGGAGGTGGTGAGGA |
CcCHL3 | CCTTGTGCTCCGAAAGGAGT | CCTTGTGCTCCGAAAGGAGT |
Fig. 1 Effect of different storage temperatures on the expression of CcHY5 in mandarin fruit peel A:FPKM values from RNAseq data,different lowercase letters indicate significant difference at 0.05 level;B:Gene quantification by RT-qPCR. * α = 0.05,** α = 0.01.
顺式作用元件 cis-Element | 序列 Sequence | 预测功能 Predictive function | 数量 Quantity |
---|---|---|---|
ABRE | ACGTG | 脱落酸响应元件 Response element for abscisic acid | 2 |
CACGTG | 脱落酸响应元件 Response element for abscisic acid | 1 | |
Box 4 | ATTAAT | 光响应元件 Response element for light | 4 |
G-box | CACGTG | 光响应元件 Response element for light | 2 |
TACGTG | 光响应元件 Response element for light | 1 | |
ACE | CTAACGTATT | 光响应元件 Response element for light | 1 |
CAT-box | GCCACT | 分生组织表达元件 Expression element of meristem tissue | 2 |
AuxRR-core | GGTCCAT | 生长素响应元件 Response element for auxin | 1 |
CGTCA-motif | CGTCA | 茉莉酸甲酯响应元件 Response element for methyl jasmonate | 1 |
TGACG-motif | TGACG | 茉莉酸甲酯响应元件 Response element for methyl jasmonate | 1 |
ARE | AAACCA | 厌氧诱导响应元件 Anaerobic induced response element | 3 |
CCAAT-box | CAACGG | MYB结合位点 MYB binding site | 1 |
Table 2 Analysis of cis-elements in CcHY5 promoter region
顺式作用元件 cis-Element | 序列 Sequence | 预测功能 Predictive function | 数量 Quantity |
---|---|---|---|
ABRE | ACGTG | 脱落酸响应元件 Response element for abscisic acid | 2 |
CACGTG | 脱落酸响应元件 Response element for abscisic acid | 1 | |
Box 4 | ATTAAT | 光响应元件 Response element for light | 4 |
G-box | CACGTG | 光响应元件 Response element for light | 2 |
TACGTG | 光响应元件 Response element for light | 1 | |
ACE | CTAACGTATT | 光响应元件 Response element for light | 1 |
CAT-box | GCCACT | 分生组织表达元件 Expression element of meristem tissue | 2 |
AuxRR-core | GGTCCAT | 生长素响应元件 Response element for auxin | 1 |
CGTCA-motif | CGTCA | 茉莉酸甲酯响应元件 Response element for methyl jasmonate | 1 |
TGACG-motif | TGACG | 茉莉酸甲酯响应元件 Response element for methyl jasmonate | 1 |
ARE | AAACCA | 厌氧诱导响应元件 Anaerobic induced response element | 3 |
CCAAT-box | CAACGG | MYB结合位点 MYB binding site | 1 |
Fig. 5 Analysis of transcriptional activation activity of CcHY5 in yeast The pGBKT7-CcHY5 transformed yeast cells were cultured in single-deficient and triple-deficient medium with pGBKT7-53 + pGADT7-T as positive control and pGBKT7 as negative control. And transcriptional activation activity was analyzed based on yeast growth status and color change with addition of X-α-Gal.
Fig. 8 Effect of different storage temperatures on the expression of CcHY5 in mandarin fruit peel after transient overexpression Significant difference analysis used Duncan’s test,different lowercase letters indicate significant difference between different treatments at the same time,P < 0.05.
Fig. 10 Effects of transient overexpression of CcHY5 on the content of carotenoid and its metabolites in the peel of mandarin fruit(25 ℃) Student’s t-test,* α = 0.05.
Fig. 11 Effects of transient overexpression of CcHY5 on the content of chlorophyll and its metabolites in the peel of mandarin fruit(25 ℃) Student’s t-test,* α = 0.05,** α = 0.01.
Fig. 12 Effects of transient overexpression of CcHY5 on the relative expression of CcHY5 and chlorophyll metabolism pathway related genes in mandarin fruit peel(25 ℃) Student’s t-test,* α = 0.05,** α = 0.01.
Fig. 13 Pearson correlation analysis of chlorophyll and its metabolites and chlorophyll metabolism genes in mandarin fruit peel after transient overexpression of CcHY5 *P < 0.05,** P < 0.01.
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