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ACTA HORTICULTURAE SINICA ›› 2012, Vol. 39 ›› Issue (2): 253-264.

• Fruit Trees • Previous Articles     Next Articles

Cloning of TIR1 and ABP1 Genes from Embryogenic Calli of Longan and Analysis of Their Expression During Longan Somatic Embryogenesis

LI Hui-hua1,2,LAI Zhong-xiong1,*,SU Ming-hua2,and LIN Yu-ling1   

  1. 1Institute of Horticultural Biotechnology,Fujian Agriculture and Forestry University,Fuzhou 350002,China;2Fujian Institute of Subtropical Botany,Xiamen,Fujian 361006,China
  • Received:2011-09-01 Revised:2012-01-16 Online:2012-02-25 Published:2012-02-25
  • Contact: LAI Zhong-xiong E-mail:Laizx01@163.com

Abstract: The RT-PCR with RACE method was used to clone the complete mRNA sequences of the transport inhibitor response 1 gene(DL-TIR1) and auxin binding protein 1 gene(DL-ABP1)from embryogenic calli of longan(Dimocarpus longan Lour.). And bioinformatics methods were used to analyze obtained sequences and putative amino acid sequences. Then qRT-PCR(real-time reverse transcription PCR)method was used to determine the mRNA transcription level of two genes in the process of somatic embryogenesis in longan. The results were as follows:The full length TIR1(DL-TIR1,GenBank,GQ870264) mRNA,about 2 328 bp,consisting of an open reading frame of 1 761 bp ,and 5′ and 3′ untranslated regions of 118 bp and 449 bp,respectively. The putative protein had 586 amino acids,and the identity with the other polypeptides varied between 85%–57%. DL-TIR1 expressed in 8 different stages during somatic embryogenesis,which showed approximately a“W”curve. The full length ABP1(DL-ABP1,GenBank,GQ900592)mRNA,about 869 bp,consisting of an open reading frame of 567 bp,and 5' and 3' untranslated regions of 43 bp and 259 bp,respectively. The putative protein had 188 amino acids,and the identity with the other polypeptides varied between 87%–72%. The expression of DL-ABP1 in 8 different stages during somatic embryogenesis also showed approximately a“W”curve. The mRNA transcription level of the auxin receptor gene DL-TIR1 and the potential auxin receptor gene DL-ABP1 were very similar.

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