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园艺学报 ›› 2026, Vol. 53 ›› Issue (8): 2363-2380.doi: 10.16420/j.issn.0513-353x.2025-0492

• 遗传育种 · 种质资源 · 分子生物学 • 上一篇    下一篇

基于数量分类与全基因组重测序的映山红亚属品种群鉴定

陈少敏, 周浩洋, 孔秋生, 刘秀群*()   

  1. 华中农业大学园林林学学院果蔬园艺作物种质创新与利用全国重点实验室, 武汉 430070
  • 收稿日期:2026-05-15 修回日期:2026-06-15 出版日期:2026-08-25 发布日期:2026-08-25
  • 通讯作者:
  • 基金资助:
    西藏自治区科技计划重点研发及转化项目(XZ202201ZY0006N)

Identification of Rhododendron subgenus Tsutsusi Cultivar Groups Based on Numerical Taxonomy and Whole Genome Resequencing

CHEN Shaomin, ZHOU Haoyang, KONG Qiusheng, LIU Xiuqun*()   

  1. National Key Laboratory of Germplasm Innovation and Utilization of Horticultural CropsCollege of Horticulture and Forestry Sciences,Huazhong Agricultural University, Wuhan 430070, China
  • Received:2026-05-15 Revised:2026-06-15 Published:2026-08-25 Online:2026-08-25

摘要:

利用数量分类与全基因组重测序技术对108个映山红亚属品种进行了品种群鉴定。以102个映山红亚属品种为试验材料,基于37个表型性状的数量分类研究表明,夏鹃品种群可通过花期与其他品种群区分开;花萼瓣化和双套花型结构可作为鉴别东鹃与其他品种群的关键性状;然而,西鹃与毛鹃品种群因表型性状较为相似,分类界限模糊。选取57个具有市场代表性的映山红亚属品种进行全基因组重测序,基于检测获得的SNP位点,对其进行聚类、PCA和群体结构分析,结果表明57个映山红亚属品种可被分为4个类群,支持现有4大品种群分类体系。同时,通过分析映山红亚属品种的遗传背景,结果显示毛鹃和东鹃品种群具有独立的遗传背景,不支持将毛鹃与东鹃合称为春鹃。结合形态学与基因组学研究支持将映山红亚属品种分为毛鹃、东鹃、西鹃和夏鹃4个品种群,但在东鹃、毛鹃与西鹃品种群中存在离群个体,建议将东鹃品种‘御代之荣’重新归类至西鹃品种群,将毛鹃‘双季桃红’作为东鹃‘状元红’的异名处理。

关键词: 映山红亚属, 品种群, 数量分类, 全基因组重测序, SNP, 聚类分析

Abstract:

Based on numerical taxonomy and whole genome resequencing,varietal groups among 108 Rhododendron subgenus Tsutsusi cultivars in this study. Using 102 Rhododendron subgenus Tsutsusi cultivars as experimental materials,the results of a numerical taxonomy study based on 37 phenotypic traits showed that the Summer azalea group can be differentiated from other groups by flowering period,while sepal petaloidy and hose-in-hose corolla type served as key traits for distinguishing the East azalea group from others. However,due to the high similarity in phenotypic traits,the classification boundary between the West azalea and Hairy azalea groups remained unclear. 57 commercially representative cultivars of Rhododendron subgenus Tsutsusi were selected for whole genome resequencing. Clustering analysis,PCA,and population structure analysis based on the detected SNPs indicated that the 57 cultivars of Rhododendron subgenus Tsutsusi could be divided into four groups,supporting the existing classification system comprising four major cultivar groups. Furthermore,the analysis about genetic background revealed that the Hairy and East azalea groups are independent,thereby refuting the proposal to merge them under the term“Spring azalea”. Integrating morphological and genomic evidences support the classification of Rhododendron subgenus Tsutsusi cultivars into four variety groups:Hairy azalea,East azalea,West azalea,and Summer azalea. However,outlier individuals were identified within the East azalea,Hairy azalea,and West azalea groups. This study recommends reclassifying the East azalea cultivar R.‘Yudaizhirong’into the West azalea group,and proposes treating the Hairy azalea cultivar R. ‘Shuangjitaohong’as a synonym of the East azalea cultivar R.‘Zhuangyuanhong’.

Key words: Rhododendron subgenus Tsutsusi, cultivar groups, numerical taxonomy, whole genome resequencing, SNP, clustering analysis