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ACTA HORTICULTURAE SINICA ›› 2019, Vol. 46 ›› Issue (12): 2369-2382.doi: 10.16420/j.issn.0513-353x.2019-0320

• Research Papers • Previous Articles     Next Articles

Identification and Expression Profiling Analysis of TCP Family Genes Involved in Growth and Development in Camellia sinensis

WEN Beibei1,LUO Yong1,LIU Dongmin1,ZHANG Xiangna1,LI Juan1,2,3,WANG Yingzi1,2,3,WANG Kunbo1,2,3,*,and HUANG Jian’an1,2,3,*   

  1. 1Key Laboratory of Ministry of Education for Tea Science,Hunan Agricultural University,Changsha 410128,China;2National Research Center of Engineering Technology for Utilization of Botanical Functional Ingredients,Changsha 410128,China;3Hunan Collaborative Innovation Center of Utilization of Functional Ingredients from Botanicals,Changsha 410128,China
  • Online:2019-12-25 Published:2019-12-25

Abstract: In this study,a genome-wide analysis of TCP genes was performed in Camellia sinensis,including identification,chromosomal localization,gene structure,phylogenetic analyses and expression analysis in different organs. In all,thirty-six proteins were identified with typical TCP domains. The length of CDS is from 453 to 1 824 bp,and proteins’ length is from 150 to 607 aa(amino acids).These identified CsTCP members were named as CsTCP1–CsTCP30. Phylogenetic and comprehensive bioinformatics analyses of these genes revealed that Camellia sinensis TCP family proteins could be classified into two classes(ClassⅠand ClassⅡ),which could be further divided into eight subgroups(A–H). Among them,ClassⅠ are also known as PCF or TCP-P,and ClassⅡcan be clustered into CYC/TB1 and CIN types. Gene structures and conserved motif analysis of CsTCPs indicated that different types of TCP genes had undergone different evolutionary processes and the genes in the same clade had similar chromosomal location,gene structure,and conserved domains. Except for CsTCP21b the expression of all 35 CsTCP genes could be detected in tea leaves of different growth stages,and qRT-PCR experiments results revealed that the CsTCPs gene family exhibited distinct expression pattern in different tissues. GA3 and ABA treatments could promote or repress the expression of CsTCPs,significantly.

Key words: Camellia sinensis, TCP transcription factor, whole genome;phylogenetic analysis, qRT-PCR expression

CLC Number: