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ACTA HORTICULTURAE SINICA ›› 2019, Vol. 46 ›› Issue (10): 2037-2046.doi: 10.16420/j.issn.0513-353x.2018-1074

• Research Notes • Previous Articles     Next Articles

Genome and Biology of an Isolate of Apple stem pitting virus from Inner Mongolia,China

SUN Pingping,JU Mingxiu,MA Qiang*,and LI Zhengnan*   

  1. College of Horticulture and Plant Protection,Inner Mongolia Agricultural University,Huhhot 010018,China
  • Online:2019-10-25 Published:2019-10-25

Abstract: One Apple spot pitting virus(ASPV)isolate NM was collected from an infected‘Jinhong’apple in Hohhot,Inner Mongolia,China,and its complete genome sequence was determined by RT-PCR and RACE techniques. The Genbank accession No. is MK239268. The single-stranded positive RNA genome of ASPV-NM had 9286 nucleotides, excluding the poly A tail, and its shared sequence identities with the 17 published ASPV genomes in NCBI were from 70.6% to 79.2%. The phylogenetic trees based on complete genome,RNA-dependent RNA polymerase(RdRp)and Coat protein(CP)sequences showed ASPV-NM clustered into Group Ⅲ,Ⅲ andⅠ,respectively. One clear recombination event was identified in the isolate ASPV-NM. The ASPV-NM was sap-inoculated into Nicotiana occidentalis 37B,causing typical symptoms of yellow spots and chlorosis,and the infection was further confirmed by the transmission electron microscope.

Key words: Apple stem pitting virus, Inner Mongolia, RACE, recombination

CLC Number: