https://www.ahs.ac.cn/images/0513-353X/images/top-banner1.jpg|#|苹果
https://www.ahs.ac.cn/images/0513-353X/images/top-banner2.jpg|#|甘蓝
https://www.ahs.ac.cn/images/0513-353X/images/top-banner3.jpg|#|菊花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner4.jpg|#|灵芝
https://www.ahs.ac.cn/images/0513-353X/images/top-banner5.jpg|#|桃
https://www.ahs.ac.cn/images/0513-353X/images/top-banner6.jpg|#|黄瓜
https://www.ahs.ac.cn/images/0513-353X/images/top-banner7.jpg|#|蝴蝶兰
https://www.ahs.ac.cn/images/0513-353X/images/top-banner8.jpg|#|樱桃
https://www.ahs.ac.cn/images/0513-353X/images/top-banner9.jpg|#|观赏荷花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner10.jpg|#|菊花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner11.jpg|#|月季
https://www.ahs.ac.cn/images/0513-353X/images/top-banner12.jpg|#|菊花

园艺学报 ›› 2017, Vol. 44 ›› Issue (3): 475-486.doi: 10.16420/j.issn.0513-353x.2016-0831

• 研究论文 • 上一篇    下一篇

高温胁迫下茄子qRT-PCR内参基因筛选及稳定性分析

庞强强1,2,3,李植良1,罗少波1,陈日远2,金庆敏1,黎振兴1,李德明3,孙保娟1,*,孙光闻2,*   

  1. 1广东省农业科学院蔬菜研究所,广州 5106402华南农业大学园艺学院,广州 5106423海南省农业科学院蔬菜研究所,海口 570100
  • 出版日期:2017-03-25 发布日期:2017-03-25

Selection and Stability Analysis of Reference Gene for qRT-PCRin Eggplant Under High Temperature Stress

PANG Qiangqiang1,2,3,LI Zhiliang1,LUO Shaobo1,CHEN Riyuan2,JIN Qingmin1,LI Zhenxing1,LI Deming3,SUN Baojuan1,*,and SUN Guangwen2,*   

  1. 1Vegetable Research InstituteGuangdong Academy of Agricultural SciencesGuangzhou 510640China2Horticultural CollegeSouth China Agricultural UniversityGuangzhou 510642China3Vegetable Research InstituteHainan Academy of Agricultural SciencesHaikou 570100China
  • Online:2017-03-25 Published:2017-03-25

摘要:

为筛选茄子(Solanum melongena L.)高温胁迫下稳定表达的内参基因,以不同茄子品系(种)为研究对象PCR技术对来自茄子高温胁迫转录组数据库8个候选内参基因(SmEF1aSmEF2Sm40sRPS29Sm60sRPL24SmTRXSmCK ISmDAHPS ISmUCP)和SmActin在不同试验情况下进行表达检测,并结合GeNorm、NormFinder、BestKeeper和ReFinder软件综合评价9个内参基因的表达稳定性。结果表明,在茄子热敏品系05-1和耐热品系05-4经高温处理不同时间的样品和不同组织样品以及10个耐热性不同的茄子品系(种)中,9个内参基因的表达丰度及稳定性存在差异;茄子热敏品系05-1和耐热品系05-4高温胁迫处理不同时间样品中表达稳定性最好的是SmEF1aSmUCP;其不同组织中表达水平最稳定的是SmEF1aSmTRX;高温胁迫下不同茄子品系(种)中以SmTRXSmEF2的表达稳定性最好。综合来看,SmEF1aSmTRX在所有茄子试验样品中的表达稳定性最好,而SmActinSmCK I的表达稳定性较差。利用实时荧光定量

关键词: 茄子, 高温胁迫, 内参基因, 表达稳定性, 实时荧光定量PCR

Abstract:

The present study aimed at selecting the stable reference genes to ensure the reliability and accuracy in gene expression analysis of eggplant(Solanum melongena L.) under high temperature stress. By real-time fluorescence quantitative RT-PCR technology,we investigated the expression stability of eight candidate reference genes(SmEF1aSmEF2Sm40sRPS29Sm60sRPL24SmTRXSmCKⅠSmDAHPSⅠSmUCP)from RNA-Seq database under high temperature stress and SmActin,and the stability of expression of nine reference genes were evaluated by GeNorm,NormFinder,BestKeeper and ReFinder,respectively. The results showed that,at different periods,different tissues and different lines of eggplant under high temperature,the expression abundance and stability of these nine reference genes are different. When analyzing the gene expression of thermo-sensitive line 05-1 and thermo-resistant line 05-4 under high temperature stress,SmEF1a and SmUCP were the best reference genes for different periods ,and SmEF1a and SmTRX could be used as best reference genes for different tissues. Meanwhile,SmTRX and SmEF2 could be used as best reference genes in lines or varieties with different thermo-tolerance. On the whole,SmEF1a and SmTRX exhibited the most stable expression among all of the tested samples,while SmActin and SmCKexhibited the least stable expression under most of the experimental conditions. It was found to be feasible and efficient to identify stably expressed genes from transcriptome database under high temperature stress as candidate reference genes,which will be helpful for the study of expression of genes response to high temperature and the mechanisms of thermo-tolerance in eggplant.

Key words: Solanum melongena, high temperature stress, reference gene, expression stability, real-time fluorescence quantitative PCR