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园艺学报 ›› 2011, Vol. 38 ›› Issue (5): 921-929.

• 蔬菜 • 上一篇    下一篇

银耳α–微管蛋白基因的克隆及序列分析

董吉元,杨双熙,陈叶叶,刘 娟,马爱民*   

  1. (华中农业大学食品科学与技术学院,武汉 430070)
  • 收稿日期:2010-12-01 修回日期:2011-04-26 出版日期:2011-05-25 发布日期:2011-05-25
  • 通讯作者: 马爱民

Cloning and Sequence Analysis of α-tubulin Gene from Tremella fuciformis

DONG Ji-yuan,YANG Shuang-xi,CHEN Ye-ye,LIU Juan,and MA Ai-min*   

  1. (College of Food Science and Technology,Huazhong Agricultural University,Wuhan 430070,China)
  • Received:2010-12-01 Revised:2011-04-26 Online:2011-05-25 Published:2011-05-25
  • Contact: MA Ai-min

摘要: 根据GenBank上已发表的其他真菌α–微管蛋白基因序列中的保守区域设计简并引物,扩增出银耳α–微管蛋白基因的cDNA部分序列。分别利用SEFA-PCR方法和RACE技术,克隆了银耳α–微管蛋白基因的DNA和cDNA全长序列。银耳α–微管蛋白基因DNA全长1 962 bp,含有9个内含子,cDNA全长1 347 bp,编码448个氨基酸。生物信息学分析结果表明:银耳α–微管蛋白基因的cDNA序列与新型隐球酵母有80%相似性,编码的蛋白质属于Tubulin_FtsZ超家族中的α–微管蛋白亚家族,氨基酸序列中存在保守的GTP结合区域GGGTGSG,系统发育树显示银耳与新型隐球酵母距离最近。

关键词: 银耳, α–微管蛋白, 克隆, 序列分析, 系统发育树

Abstract: Partial cDNA sequence of α-tubulin gene was amplified from Tremella fuciformis by degenerate primers designed according to the conserved regions of published α-tubulin sequences of other fungi on GenBank. The DNA and cDNA full length sequences of α-tubulin gene of T. fuciformis were cloned by SEFA-PCR and RACE,respectively. The DNA sequence of α-tubulin gene of T. fuciformis consisted of 1 962 bp,containing 9 introns and the cDNA sequence consisted of 1 347 bp,coding 448 amino acids. Bioinformatics analysis showed the similarity between α-tubulin cDNAs of T. fuciformis and Cryptococcus neoformans reaches to 80%,the α-tubulin of T. fuciformis belongs to α-tubulin subfamily of Tubulin_FtsZ superfamily and its amino acid sequence contains a conservative GTP binding region GGGTGSG. Phylogenetic tree revealed the evolutionary distance between T. fuciformis and C. neoformans is the nearest.

Key words: Tremella fuciformis, α-tubulin, cloning, sequence analysis, phylogenetic tree

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