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园艺学报 ›› 2010, Vol. 37 ›› Issue (2): 283-290.

• 其它园艺植物 • 上一篇    下一篇

北柴胡鲨烯合酶基因及其编码区cDNA 克隆与序列分析

隋春1;魏建和1,*;战晴晴1,2;杨成民1   

  1. (1 中国医学科学院,北京协和医学院药用植物研究所,北京 100193;2 东北林业大学生命科学院,哈尔滨 150040)
  • 收稿日期:2009-11-26 修回日期:2010-01-25 出版日期:2010-02-25 发布日期:2010-02-25

Cloning and Sequence Analysis of Squalene Synthase Gene and cDNA inBupleurum chinense DC.

SUI Chun1;WEI Jian-he1,*;ZHAN Qing-qing1, 2;YANG Cheng-min1

  

  1. (1Institute of Medicinal Plant Development,Chinese Academy of Medical Sciences & Peking Union Medical College,Beijing 100193,China;2College of Life Science,Northeast Forestry University, Harbin 150040,China)
  • Received:2009-11-26 Revised:2010-01-25 Online:2010-02-25 Published:2010-02-25

摘要: 鲨烯合酶(EC.2.5.1.21,squalene synthase,SS)是植物甾醇和三萜化合物生物合成途径中的关键酶。为研究鲨烯合酶在柴胡皂苷生物合成中的作用,以北柴胡(Bupleurum chinense DC.)不定根为试材,采用Trizol 法提取总RNA,利用RT-PCR 方法从北柴胡中扩增出了鲨烯合酶cDNA 特异片段,并进行了克隆、测序。测序结果显示得到了两个序列不同的cDNA(BcSS1 和BcSS2),分别为1 245 bp 和1 248 bp,分别编码414 及415 个氨基酸。BcSS1 和BcSS2 间的核苷酸和氨基酸一致性分别为98%和96%。NCBI Blastx结果显示与三岛柴胡和三七SS 氨基酸序列相似性最高, BcSS1 的一致性分别为99%和90%,BcSS2 的分别为97%和87%。在此基础上,利用PCR 技术从北柴胡不定根中扩增得到了一个SS 基因克隆,长5 880 bp,包含12 个内含子。

关键词: 北柴胡, 柴胡皂苷, 鲨烯合酶基因(SS), RT-PCR, PCR

Abstract: Abstract:Squalene synthase(EC.2.5.1.21, SS)is an important key enzyme in biosynthesis pathway of plant sterols and terpenoids. In order to learn the role of SS in the biosynthesis of saikosaponin in Bupleurum chinense DC., SS cDNA was cloned with total RNA extracted from adventitious roots of B. chinense using Trizol method. Specific fragments were amplified by RT-PCR and then were cloned and sequenced. Sequencing results showed two different cDNA fragments(BcSS1 and BcSS2)with 1 245 bp and 1 248 bp long were obtained which encodes proteins with 414 and 415 amino acids, respectively. The identities of nucleotides and amino acids between BcSS1 and BcSS2 were 98% and 96%. NCBI Blastx search results showed BcSS1 and BcSS2 had the highest amino acid similarity to the corresponding proteins from B.falcatum L. and Panax notoginseng F. H. Chen. The identities of BcSS1 with the two proteins were 99 % and 90% and those of BcSS2 were 97% and 87%. SS gene with 5 880 bp containing 12 introns was then amplified by PCR with genomic DNA extracted from adventitious roots of B. chinense using CTAB method.

Key words: Bupleurum chinense DC., saikosaponin, squalene synthase gene(SS), RT-PCR, PCR