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园艺学报 ›› 2020, Vol. 47 ›› Issue (3): 571-580.doi: 10.16420/j.issn.0513-353x.2018-1058

• 研究报告 • 上一篇    下一篇

利用 QTL-seq 定位番茄果实质量 QTL

魏 凯 1,刘晓燕 1,2,曹 雪 1,刘晓林 1,王晓甜 1,杨孟霞 1,王 净 1,王孝宣 1,国艳梅 1,杜永臣 1,李君明 1,刘 磊 1,舒金帅 1,秦 勇 2,黄泽军 1,*   

  1. 1 中国农业科学院蔬菜花卉研究所,农业农村部园艺作物生物学与种质创制重点实验室,北京 100081;2 新疆农业大学林学与园艺学院,乌鲁木齐 830052
  • 出版日期:2020-03-25 发布日期:2020-03-25
  • 基金资助:
    国家自然科学基金项目(31471889,31672154);农业农村部园艺作物生物学与种质创制重点实验室项目

Identification of Quantitative Trait Loci Controlling Tomato Fruit Weight by QTL-seq

WEI Kai1,LIU Xiaoyan1,2,CAO Xue1,LIU Xiaolin1,WANG Xiaotian1,YANG Mengxia1,WANG Jing1,WANG Xiaoxuan1,GUO Yanmei1,DU Yongchen1,LI Junming1,LIU Lei1,SHU Jinshuai1,QIN Yong2,and HUANG Zejun1,*   

  1. 1Institute of Vegetables and Flowers,Chinese Academy of Agricultural Sciences,Beijing 100081,China;2 College of Forestry and Horticulture,Xinjiang Agricultural University,Urumqi 830052,China
  • Online:2020-03-25 Published:2020-03-25

摘要: 为了分析樱桃番茄‘VFNT Cherry’(syn. LA1221)和加工番茄‘Heinz1706’组配的 F1 代果实质量超亲杂种优势的遗传基础,利用其 F2 群体,通过 QTL-seq 和单标记分析法进行了果实质量 QTL定位,共检测到 10 个果实质量位点,其中 8 个位点的大果等位基因为显性,包括部分显性位点 5 个[QTL for Fruit Weight 2.1(qFW2.1)、qFW5.2、qFW7.1、qFW8.1、qFW9.1]和超显性位点 3 个(qFW1.1、qFW5.1、 qFW6.1)。而且 qFW2.1、qFW5.1、qFW7.1、qFW8.1、qFW9.1 的大果等位基因来自‘Heinz1706’,qFW1.1、qFW5.2、qFW6.1 的大果等位基因来自‘VFNT Cherry’。因此 F1 代番茄果实质量出现超亲现象可能是由于其聚合了来自双亲的显性大果等位基因。上述 8 个显性位点中 qFW9.1 的表型变异贡献率最高,达到12.19%。通过交换单株后代鉴定进一步验证了 qFW9.1 位点并将其定位区间缩小到 4.5 Mb。

关键词: 番茄, 果实质量, QTL-seq, 单标记分析

Abstract: The fruit weight of F1 generation derived from the cross between cherry tomato‘VFNT Cherry’(syn. LA1221)and processed tomato‘Heinz1706’was over parents,showing obvious heterosis. In order to analyze the genetic basis of this phenomenon,using F2 population obtained from the above F1generation self-crossing,the QTL mapping of tomato fruit weight was carried out by QTL-seq and single marker analysis. A total of ten fruit weight QTLs were identified,and eight of which were dominant. Among the eight dominant QTLs,five QTLs were incomplete dominant[QTL for Fruit Weight 2.1(qFW2.1),qFW5.2,qFW7.1,qFW8.1,qFW9.1],and three QTLs were over-dominant[qFW1.1,qFW5.1,qFW6.1]. Moreover,the big fruit alleles of qFW2.1,qFW5.1,qFW7.1,qFW8.1,and qFW9.1 were from‘Heinz1706’,and the big fruit alleles of qFW1.1,qFW5.2,qFW6.1 were from‘VFNT Cherry’. Therefore,the heterosis of tomato fruit weight in the above F1 generation may be due to its aggregation of dominant large fruit alleles from both parents. Among the eight dominant QTLs,qFW9.1 had the highest contribution rate of phenotypic variation,reaching 12.19%. The qFW9.1 locus was further validated and narrowed to a 4.5 megabase pair by recombinant progeny testing

Key words: tomato, fruit weight, QTL-seq, single marker analysis

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