https://www.ahs.ac.cn/images/0513-353X/images/top-banner1.jpg|#|苹果
https://www.ahs.ac.cn/images/0513-353X/images/top-banner2.jpg|#|甘蓝
https://www.ahs.ac.cn/images/0513-353X/images/top-banner3.jpg|#|菊花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner4.jpg|#|灵芝
https://www.ahs.ac.cn/images/0513-353X/images/top-banner5.jpg|#|桃
https://www.ahs.ac.cn/images/0513-353X/images/top-banner6.jpg|#|黄瓜
https://www.ahs.ac.cn/images/0513-353X/images/top-banner7.jpg|#|蝴蝶兰
https://www.ahs.ac.cn/images/0513-353X/images/top-banner8.jpg|#|樱桃
https://www.ahs.ac.cn/images/0513-353X/images/top-banner9.jpg|#|观赏荷花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner10.jpg|#|菊花
https://www.ahs.ac.cn/images/0513-353X/images/top-banner11.jpg|#|月季
https://www.ahs.ac.cn/images/0513-353X/images/top-banner12.jpg|#|菊花

园艺学报 ›› 2016, Vol. 43 ›› Issue (6): 1021-1032.doi: 10.16420/j.issn.0513-353x.2015-0944;

• 果树 •    下一篇

苹果K+转运蛋白基因家族鉴定及表达分析

杨 琳,董 玲,李明军,马锋旺,邹养军*   

  1. (西北农林科技大学园艺学院,陕西杨凌 712100)
  • 出版日期:2016-06-25 发布日期:2016-06-25

Identification and Expression Analysis of Potassium Transporter Gene Family in Apple

YANG Lin,DONG Ling,LI Ming-jun,MA Feng-wang,and ZOU Yang-jun*   

  1. (College of Horticulture,Northwest A & F University,Yangling,Shaanxi 712100,China)
  • Online:2016-06-25 Published:2016-06-25

摘要:

利用苹果基因组筛选K+转运蛋白基因,分析其系统发育关系,通过qRT-PCR检测它们在平邑甜茶各器官组织和不同发育阶段果实的表达特征。结果表明,在苹果中存在65K+转运蛋白基因,包括CHX家族(33个)、HAK家族(24个)、HKT家族(1个)和KEA家族(7个),它们与拟南芥K+转运蛋白基因高度同源,其基因结构相对保守,并且不均匀地分布在13条染色体上。定量表达分析发现,K+转运蛋白基因具有不同的表达模式,其中在根中高度表达的32个,在叶片中高度表达的12个,在茎尖中高度表达的11个,在果实中高度表达的19个。研究结果为揭示苹果K+转运蛋白基因的功能提供了基础资料。

关键词: 苹果, K+转运蛋白, 基因家族, 生物信息学, 表达特性

Abstract:

In this studythe information that contained phylogenetic relationship and distribution of apple potassiumK+transporter genes was analyzed based on Malus genome databaseand their expression characteristics were explored by means of qRT-PCRs in apple. The results showed that 65 K+ transporter genes were identifiedand they were divided into 4 familiesCHX familyHAK familyHKT family and KEA familyincluding 33241 and 7 membersrespectively. These genes are highly homologous with Arabidopsis thaliana K+ transporter genes. Chromosomal localization exhibited that these K+ transporter genes were distributed in the thirteen of seventeen apple chromosomes unevenly. Quantitative expression analysis showed that most of the K+ transporter genes had differential expression patterns. The thirty-two genes had higher expression abundance in root while 12 genes in mature leaves11 genes in shoot tips and 19 genes in fruit. The results lay a basis for revealing the function of K+ transporter genes in apple.

Key words: Malus × domestica, potassium transporter, gene family, bioinformatic, expression characteristic

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